Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2941 ATGGAGAAAAAAACATTTCCTTCTCTTCATCTTTTCACAGAGTTCAAACCACACATGCTCATGATCTTAGCCCAAATTTCCTATACTTTCTTATATTTCATCACTGAAGCTTCCTTTAACCAAGGAATGAGTCCTTATGTTTATGTTACATATCGTCATGCTATCGCCGGAGTTGTCATGTTTCCTTTCGCGTATTTTCTCGAGAGAAACATGAGACCAAAGTTGACATTTGCTCTTTTTATGGAGTTTTTTCTGCTTGCACTGTTAGGGATGAGTTTATCTATCAACTTGTACTTTGCAAGCTTGAAGTATACTTCTCCAACCTTTCTCTCTTCCATGTACAACACCATATCTTCTCTTACCTTCATTATTGCAGTAGCACTAAGGTTTGAGGTTCTTGATCTTCATAATCCACGTGGGATAGCGAAAGTACTTGGAACTATAGTATCCTTAGGTGGAGTTACGACCATGACACTATACAAAGGGCCTATAATCAGAAATTTGTGGCATCCTCTAATTCATATTCCACCAAAAAGTGCTTCTATCAATGAAAGTGGCTTAAAGGGTTCACTTCTTACCGTTTCATGTTGTATTTTGTTTTCTATGTCCTACATCATGCAGGCATCCACTTTGAAAAGGTATCCTGCACAATTATCACTCACAACATGGTTGTGTTTTATTGGAGGAGCACAATCAGCTGTTTTCACAGTGATAGCAGAACACAATAACCCTTCAGCATGGATCATAGGATTCAGTTTTGACTTTTGGTCAACAATATATGGGGGAATTATTGTTGGTGGTTTGTTCATATACGTTAACCTATGGTGCACTGAGAAAAAAGGACCAGTTTTTGTCACAGTATTTAACCCTCTTTGTACTATATTTGTGACAATTCTAGCATATTTCGTCGTTGGAGAAAAACTTTATTTGGGCAGTATCATAGGTGCAATTATTGTGATCACGGGTTTGTACTTGTTGCTGTGGGGTAAAGAAGGTGACAATGAGGTTGATTTCAAGGCCAAAGATAAATTGCAGTACAATATTGAAGACCTTGAAGAATGCAAAATATAG 1071 0.3744 MEKKTFPSLHLFTEFKPHMLMILAQISYTFLYFITEASFNQGMSPYVYVTYRHAIAGVVMFPFAYFLERNMRPKLTFALFMEFFLLALLGMSLSINLYFASLKYTSPTFLSSMYNTISSLTFIIAVALRFEVLDLHNPRGIAKVLGTIVSLGGVTTMTLYKGPIIRNLWHPLIHIPPKSASINESGLKGSLLTVSCCILFSMSYIMQASTLKRYPAQLSLTTWLCFIGGAQSAVFTVIAEHNNPSAWIIGFSFDFWSTIYGGIIVGGLFIYVNLWCTEKKGPVFVTVFNPLCTIFVTILAYFVVGEKLYLGSIIGAIIVITGLYLLLWGKEGDNEVDFKAKDKLQYNIEDLEECKI* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2941 356 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020|GO:0016021
Psa6g2941 356 Pfam EamA-like transporter family 17 154 IPR000620 GO:0016020|GO:0016021
Psa6g2941 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 160 - -
Psa6g2941 356 PANTHER WAT1-RELATED PROTEIN 15 343 IPR030184 GO:0016021|GO:0022857
Psa6g2941 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 330 - -
Psa6g2941 356 PANTHER WAT1-RELATED PROTEIN 15 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2941 Psa-Chr6 245163493 245165358 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2941 12 352 Nodulin-like Gene Family AT5G07050 42.373 3.66e-93 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2941 - - gmx:100527877 526.168