Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2875 ATGGCAGGACAACTAGGAGTGCTTAATGCACTCGATGTGGCAAAGACACAAATGTACCATTTCACAGCAATTGTGATTGCTGGAATGGGTTTTTTCACTGATGCTTATGATCTCTTCTGCATTTCTCTTGTCACAAAGTTGTTAGGAAGAATCTATTACACAGATTACACCAAACCGAAACCGGGTGTGCTTCCTCCCGGTGTTCAAGCCGGTGTAACCGGTGTCGCGCTATGCGGGACTTTAGCCGGCCAACTATTCTTCGGTTGGCTTGGTGACAAATTGGGAAGAAAAAAAGTTTATGGAATGACCCTTATGCTTATGGTAGGTTGTTCACTTGCCTCAGGACTTTCCTTTGGAAGTAGTCCAAAGAGTGTTATGGCAACACTTTGTTTCTTCAGGTTTTGGCTTGGTTTTGGAATTGGTGGTGATTACCCTCTTTCCGCTACAATTATGTCTGAGTATGCTAACAAAAAGACGCGAGGCGCGTTCATCGCTGCGGTGTTTGCTATGCAGGGATTCGGAATCATGGCTGGTGGAATATTTGCCTTGATTGTGGCTACTGCATTTGATCACAAATATAAAGTTCCTACTTATGAAGAAAACCACGAAGCGTCGCTTGTGTTGCCGGCTTTTGACTACGTTTGGCGTTTGATCTTAATGTTTGGTGCTGTTCCAGCAGCTCTTACCTATTACTGGCGTATGAAAATGCCCGAGACGGCTCGTTACACAGCACTTGTTGCTAAGAACGCGAAACAAGCCGCTTCTGATATGTCGAAGGTGTTACAAGTTGAACTTCAAGCTGAAGAGGAGAAAGTGCAGCACATAGTTGAGAACAAAAGCCAAAAGTTTGGCCTATTTAGCAAGCAATTCGCCAAGCGCCACGGTATGCACTTGTTGGGAACAACAACTACTTGGTTCTTGTTAGACATTGCTTTCTACAGTCAGAATCTTTTCCAAAAAGACATTTTCACTGCCATTGGATGGATTCCTCCGGCGAATGAAATGAATGCAATTCACGAACTTTATAGGATTGCAAGAGCACAAACACTTATAGCAATGTGCAGTACAGTTCCCGGTTACTGGTTCACTGTCGCGTTCATCGATTACATGGGTCGATTCGCGATCCAACTAATGGGTTTCTTCTTCATGACTGTTTTCATGTTTGCTCTAGCCATACCTTATGATCACTGGACAAAGAAAGAAAACAGAATCGGGTTTGTCGTGATGTACTCATTAACTTTCTTTTTCGCCAATTTCGGTCCAAATGCTACCACATTTGTTGTTCCAGCTGAGATTTTCCCTGCCAGACTAAGGTCTACCTGTCACGGTATCTCGGCCGCTGCAGGAAAAGCTGGAGCAATTGTTGGCGCATTCGGATTCTTATACGCCGCACAGAATAAGGATCCAAATAAGACTGATGCAGGTTACCCAGCTGGTATTGGTATTAAGAACTCCCTCATTATGCTTGGAGTTGTTAACTTCTTTGGAATGGTATTCACCTTCTTAGTTCCTGAAGCAAATGGAAAATCATTGGAAGAGATGAGTGGTGAGAATGAAGAAGATGGTGCTGAGGCTATTGAGATGGCAGGGCCAGGAACTGCTAGGACAGTACCTGTTTAA 1620 0.4395 MAGQLGVLNALDVAKTQMYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDYTKPKPGVLPPGVQAGVTGVALCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVGCSLASGLSFGSSPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIMAGGIFALIVATAFDHKYKVPTYEENHEASLVLPAFDYVWRLILMFGAVPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELQAEEEKVQHIVENKSQKFGLFSKQFAKRHGMHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIGWIPPANEMNAIHELYRIARAQTLIAMCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWTKKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQNKDPNKTDAGYPAGIGIKNSLIMLGVVNFFGMVFTFLVPEANGKSLEEMSGENEEDGAEAIEMAGPGTARTVPV* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2875 539 Gene3D MFS general substrate transporter like domains 19 267 IPR036259 -
Psa6g2875 539 Gene3D MFS general substrate transporter like domains 269 530 IPR036259 -
Psa6g2875 539 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 530 - -
Psa6g2875 539 MobiDBLite consensus disorder prediction 512 539 - -
Psa6g2875 539 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
Psa6g2875 539 CDD MFS_PhT 24 505 - -
Psa6g2875 539 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 508 IPR020846 GO:0022857
Psa6g2875 539 TIGRFAM 2A0109: phosphate:H+ symporter 10 517 IPR004738 GO:0005315|GO:0006817|GO:0016021
Psa6g2875 539 Pfam Sugar (and other) transporter 24 515 IPR005828 GO:0016021|GO:0022857|GO:0055085
Psa6g2875 539 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 3 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2875 Psa-Chr6 235242216 235245296 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2875 1 521 Inorganic Solute Cotransporters AT3G54700 80.651 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2875 K08176 - gmx:100802890 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2875 6 235242216 235245296 Psa6g2875 6 235242216 235245296 ECH
Psa1g2536 1 215160204 215166763 Psa6g2875 6 235242216 235245296 PCT