Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2865 ATGGCTGTGATTCAAGCTAATAGTTCTTTGGAGGATAAGAGTGTGTTTGAGTCTGGTCCTTTGAGTTTAACCATTTTGGTCCTCAAGGAACTTTTGTTGGTGTTTATTGATGGTCATGGTGGAGCTGAAGCGTCTCAGTTTGTCAGTGATAATCTTTTCTGCAATTTCAAAAAAATTGTGGTTCTGAGACACAATGTTTGGCGCGTGAAAGGCTTATTCAGGTTTCGCGATCGACGGTGTGCGTATTTGAAGAAAGCTGAATTCAATAGGGAGCCTCTACCATCTAAGTTTAGGCTAGCTGAAACATTTTTCAAGCCAATTATGAGTTGTGAGCCATCAATTTCATCTCACAAACTTCATCCTGATGATCAGTTTCTCATATTTGCTTCTGATGGATTATGGGAGCATCTTAGCAACAAGAGGCTGTTCATATAG 435 0.4 MAVIQANSSLEDKSVFESGPLSLTILVLKELLLVFIDGHGGAEASQFVSDNLFCNFKKIVVLRHNVWRVKGLFRFRDRRCAYLKKAEFNREPLPSKFRLAETFFKPIMSCEPSISSHKLHPDDQFLIFASDGLWEHLSNKRLFI* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2865 144 SUPERFAMILY PP2C-like 29 141 IPR036457 -
Psa6g2865 144 Pfam Protein phosphatase 2C 104 141 IPR001932 -
Psa6g2865 144 PANTHER ALPHABET, ISOFORM E-RELATED 58 140 - -
Psa6g2865 144 PANTHER ALPHABET, ISOFORM E-RELATED 3 58 - -
Psa6g2865 144 ProSiteProfiles PPM-type phosphatase domain profile. 1 144 IPR001932 -
Psa6g2865 144 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 58 - -
Psa6g2865 144 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 58 140 - -
Psa6g2865 144 Gene3D - 57 142 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2865 Psa-Chr6 234232302 234233630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2865 1 66 PP2C-type Phosphatase Gene Family AT3G12620 43.939 8.29e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2865 - K01102 lja:Lj5g3v0615580.1 143.28