Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2864 ATGGTGAGATCTTGCTGGAAACCTGCTGTGGATGGTGATGATGGAGATGGGAGTGGAAGTGGGAGTGGTGGGAGAGTGGATGGATTGTTATGGTACAAAGATTTAGGGAACCATGTTTATGGTGAATTTTCAATGGCTGTGATTCAAGCTAATAGTTCTTTGGAGGATAGAAGTGTGTTTGAGTCTGGTCCTTTGAGTTTTAACCATTTTGGTCCTCAAGGAACTTTTGTTGGTGTTTATGATGGTCATGGTGGAGCTGAGGCTTCTCAGTTTGTCAGTGATAATCTTTTCTGCAATTTCAAAAGGCTTGCAGCTGAAAACCAAGGCTTATCAGAAAATGTTATCAAAAGAGCATTTTTAGCAACCGAAGAAAGTTTTCTATCACTTGTGAAGAAACAGTGGCTAAGCAAGCCACATATTGCATCAGCAGGAACATGTTGTTTGGTTGGGATAATTTGCAATGGAATGATATACATTGCAAATTCCGGTGACTCGAGGGTGGTGTTAGGAAGATTAGAGAGAGCAACAAGGGAAACATCAGCTATCCAATTATCTGCAGAACATAATGTCAATCTTGAAAGAGTGAGAGATGAACTTAGATCAGAGCATCCTTTTGATTCAGAAATTGTGGTTCTGAGACACAATGTTTGGCGCGTGAAAGGCCTTATTCAGGTTTCGCGATCGATCGGTGATGCGTATTTGAAGAAAGCTGAATTCAATAGGGAGCCTCTACCATCTAAGTTTAGGCTAGCTGAAACATTTTTCAAGCCAATTATGAGTTGTGAGCCATCAATTTCATCTCACAAACTTCATCCTGATGATCAGTTTCTCATATTTGCTTCTGATGGATTATGGGAGCATCTTAGCAACCAAGAGGCTGTTCATATAGTCAGCAATAATGCACCTAATGGAATTGCAAGAAGACTTGTGAAAGCAGCATTAAGAGAAGCAGCTAAGAAGAGGGAAATGAGACTAGCAGACCTACAAAAGATTGAACAAGGAACAAGGAGACACTTTCATGATGATATAACAGTGATTGTTGTGTTTCTAAATCACAGAATGATTGATAATAGCTCTCTTTGGGGGTCACCTCTATCAATCAAGGGAGGTGGATCTGCTAATCATTAA 1128 0.4016 MVRSCWKPAVDGDDGDGSGSGSGGRVDGLLWYKDLGNHVYGEFSMAVIQANSSLEDRSVFESGPLSFNHFGPQGTFVGVYDGHGGAEASQFVSDNLFCNFKRLAAENQGLSENVIKRAFLATEESFLSLVKKQWLSKPHIASAGTCCLVGIICNGMIYIANSGDSRVVLGRLERATRETSAIQLSAEHNVNLERVRDELRSEHPFDSEIVVLRHNVWRVKGLIQVSRSIGDAYLKKAEFNREPLPSKFRLAETFFKPIMSCEPSISSHKLHPDDQFLIFASDGLWEHLSNQEAVHIVSNNAPNGIARRLVKAALREAAKKREMRLADLQKIEQGTRRHFHDDITVIVVFLNHRMIDNSSLWGSPLSIKGGGSANH* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2864 375 Pfam Protein phosphatase 2C 74 319 IPR001932 -
Psa6g2864 375 CDD PP2Cc 40 350 IPR001932 -
Psa6g2864 375 ProSiteProfiles PPM-type phosphatase domain profile. 39 350 IPR001932 -
Psa6g2864 375 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 373 - -
Psa6g2864 375 PANTHER ALPHABET, ISOFORM E-RELATED 3 373 - -
Psa6g2864 375 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Psa6g2864 375 MobiDBLite consensus disorder prediction 1 21 - -
Psa6g2864 375 SUPERFAMILY PP2C-like 49 351 IPR036457 -
Psa6g2864 375 SMART PP2C_4 36 348 IPR001932 -
Psa6g2864 375 Gene3D - 33 359 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2864 Psa-Chr6 234223382 234225989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2864 1 371 PP2C-type Phosphatase Gene Family AT3G12620 67.204 0.0 514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2864 6 234223382 234225989 Psa6g2864 6 234223382 234225989 ECH
Psa3g1601 3 144933023 144934709 Psa6g2864 6 234223382 234225989 PCT