Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2862 ATGGCCACTACCACCGTTCGTCCTCCTCCGCTAACTTCAACTTCGGAGCCACCTCCTCTTTTCGACGGAACCACCAGGCTGTACATCAGTTATACTTGCCCCTTTGCACAACGTGTATGGATCACTAGAAATTACAAGGGACTAGAAGACAAGATCGAATTGGTTCCTATTGACCTGCAAGACAGGCCTGCATGGTATAAAGAAAAGGTTTATCCTGAAAATAAGGTGCCATCTTTGGAGCACAATGGCAAGGTATTGGGAGAAAGCCTTGATTTAGTCAAATATGTTGATGCCAACTTTGAAGGAGCACCCCTCTCTCCCAATGATCCTGCCAAAAAAGAGTTTGCTGAGCAGTTGTTATCCCATCTGGATACCTTTCTCAAAGATTTGTACGGATCGTTGAAAGGGGATACTGTGCAACAAGCCGGTTCTGCTTTTGAATACTTGGAGAATGCCCTTGGTAAATTTGAGGATGGCCCCTTCCTTCTTGGTCAATTCAGTTTGGTGGATATTGCGTATGTTCCGTTCGTTGAAAGATTCCACATTATCCTTCCTGAGTTGTTCAAGTATGACATAACAGAAGGAAGACCTAAACTTGCAGCATGGATCGAGGAGCTGAACAAGATTGATGCTTATACAGAGACAAAAGTGAATCCTCAAGAAACTGTTGATACTTACAAGAAACGTTTTCTGCCTCAACAGTGA 705 0.4369 MATTTVRPPPLTSTSEPPPLFDGTTRLYISYTCPFAQRVWITRNYKGLEDKIELVPIDLQDRPAWYKEKVYPENKVPSLEHNGKVLGESLDLVKYVDANFEGAPLSPNDPAKKEFAEQLLSHLDTFLKDLYGSLKGDTVQQAGSAFEYLENALGKFEDGPFLLGQFSLVDIAYVPFVERFHIILPELFKYDITEGRPKLAAWIEELNKIDAYTETKVNPQETVDTYKKRFLPQQ* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2862 234 SUPERFAMILY Thioredoxin-like 15 105 IPR036249 -
Psa6g2862 234 Pfam Glutathione S-transferase, N-terminal domain 27 103 IPR004045 -
Psa6g2862 234 Gene3D - 102 233 - -
Psa6g2862 234 PANTHER GLUTATHIONE S-TRANSFERASE TAU 4 233 - -
Psa6g2862 234 SFLD Glutathione Transferase (cytosolic) 26 207 IPR040079 -
Psa6g2862 234 CDD GST_C_Lambda 109 227 - -
Psa6g2862 234 Gene3D Glutaredoxin 1 101 - -
Psa6g2862 234 SUPERFAMILY GST C-terminal domain-like 100 230 IPR036282 -
Psa6g2862 234 Pfam Glutathione S-transferase, C-terminal domain 139 204 - -
Psa6g2862 234 SFLD Main (cytGST) 26 207 - -
Psa6g2862 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 23 104 IPR004045 -
Psa6g2862 234 PANTHER GLUTATHIONE S-TRANSFERASE L1 4 233 IPR044629 GO:0004364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2862 Psa-Chr6 234117923 234120284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2862 7 231 Glutathione S-transferase Gene Family AT5G02790 66.667 5.67e-115 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2862 K00799 - gmx:547597 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2862 6 234117923 234120284 Psa6g2862 6 234117923 234120284 ECH