Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2850 ATGAGAAGGAAATTGAAGAAGATGATGAAGTGTGTGTGTTCAAGAGATAGGTTAAGTGTTGATGAAATGAATTATTCATCAGAGTCTCTTGCAACTAGGGACTATTCAGCAACTGCTAGTGGTTATTCGTCTCGTCCTGGTGAAAATGAAACTAAGGTGGAGGATAATGGTAACATTGAAGAAGCAGAAACCTCTCTTCGCGAAAGTGGTTACTTAAACTATGAGGAAGCTAGAGCTTTGTTAGGACGACTTGAGTATCAGAAAGGAAACATTGAAGCTGCACTTCATGTGTTTGAAGGAATAGACATTGCTGCTGTTATTCCCAAGATGAAAATCTCTATATCTAGAAGATGTGAATCGAATAATAAAAGCCGTCCCGAAAATGATTCTGTGCCTTCTATGTCATTACATGCTGTTAGTTTACTTCTTGAAGCTGTTTTTCTTAAGGCTAAATCATTGAAGACTCTTGGAAGGTTTCAAGAAGCTGCTCAATCATGCAAAACAATTTTAGACACTATTGAATCTGCATTACCAGAAGGCTGGCCTGAAAACTTTGTTTCAGATTGTAAATTACAAGAGACGGTAACAAAGGCGGTTGAACTGCTTCCGGAGCTATGGAGCCTTGCAGGTTCACCTCAAGATGTTGTTTTATCATTTAGGAAAGCCTTGCTTTATCATTGGAATCTTGACATTGAAGCAACTGCAAGAATACAAAAGGAATTTGCTTTGTTTCTTTTATACAGCGGCTACGAAGCGGACTCTCCTCCGCTTCGTTCTCAGTTGGACGGTTCCTTTGTGCCGAGAAATAACATAGAAGAAGCGGTTCTTCTGCTTCGGATTCTGCTGAGAAAAAAATCAAAAGATCCTTCGGTAATCCATCACCTTTCTTTTGCTCTTAGTGTTTGTAGTGAATTCATGACACTAGCACAGCATGTTGAGGAATTGCTTCCAGAAACCATGGAGAGAAGAGGAAGATACTATAGTCTATCTCTTTGTTACTGCGGCGAAGGCGAGAATATGGTTGCTTTGGATCTTTTGAGGAACTTTTTGAATAATAAAGAAAACTCAGTATACTCAGATTGCATAGAGGAATTGCTTTTAGCTTCGAAAATTTGTGCAGACAATAAGGTTTGTGTCGAAGACGGAATCAGATTTTCCAGCAAAGCCATTTCTCAGATGAATGGAAAATGCAATCAAATGGAAGCTATTGCAAATTGTTTACTAGGTGTTCTACTGTTAGCGAAATCCAAGTCAGTTTCTTCTGAATCAGAGAAAGTTTTGATACAATCTCAAGCATTCAGTGCTCTAAAAGCTTCTGAAAGAATGATGGAGGCTAGTGATCCAAATCCTTACATTGTTCATCATCTTTGTCTAGAATATGCGGAGCACAGGAAGCTTAGAATCGCTTACGATCAAGCAAAGAAATTGATTAAGCTTGAAGGTGGATCTAGTATTAGTGGATATATACTACTAGCAAGGATTTTATCAGCTCAAAAAAAGTTTTTCGATGCCGAGATTGTTATCGATGCTGCGTTAGAACAAAGTGGAAAATGGAATCAAGGAGAATTATTGAGGACTAAAGCTAAGATTCAGTTTGCACAGGGAAGATTGAAAAATGCTACTGAGACATACACTTTTCTTCTTGCTGTTCTTCAAGTCCAAAACAAAAACCTTGGAAATGCAAATAAGGCAATCAAGTGTAAGCGAAATCGCGACAGAAGACTAGAAATGGAAGTGTGGCATGATTTAACCGATGTATATACAGCCTTGTCGCAATGGTGTGATGCTGAAGTTTGTCTTGCCAAATCTGAAGCTATTAATCCCTATTCTGCTTCTAGATGGCACATGACAGGTATACTTTATGAAGCAAAAGGTTTACATCAAGAAGCAATGAAATCATATAGAAAAGCATTGGATATTGATCCCAACCATGTTCCGAGTTTGATATCAACAGCTTGTGTTCTGAGAAAACTTGGTGGTCAATCATCATCATCTTCAATTGTTAGAAGCCTTCTTATTGAGGCATTAAGGCTTGACAGAACAAACTCATCTGCATGGTACAATCTTGGACTTGTCTACAAAGATGATTTGGGAACATCGGCATTGGAGGCTGCTGAATGCTTTGAGGCAGCGGTTTTTCTTGAAGAATCTTGTCCCGTTGAACCCTTTAGATAA 2175 0.3862 MRRKLKKMMKCVCSRDRLSVDEMNYSSESLATRDYSATASGYSSRPGENETKVEDNGNIEEAETSLRESGYLNYEEARALLGRLEYQKGNIEAALHVFEGIDIAAVIPKMKISISRRCESNNKSRPENDSVPSMSLHAVSLLLEAVFLKAKSLKTLGRFQEAAQSCKTILDTIESALPEGWPENFVSDCKLQETVTKAVELLPELWSLAGSPQDVVLSFRKALLYHWNLDIEATARIQKEFALFLLYSGYEADSPPLRSQLDGSFVPRNNIEEAVLLLRILLRKKSKDPSVIHHLSFALSVCSEFMTLAQHVEELLPETMERRGRYYSLSLCYCGEGENMVALDLLRNFLNNKENSVYSDCIEELLLASKICADNKVCVEDGIRFSSKAISQMNGKCNQMEAIANCLLGVLLLAKSKSVSSESEKVLIQSQAFSALKASERMMEASDPNPYIVHHLCLEYAEHRKLRIAYDQAKKLIKLEGGSSISGYILLARILSAQKKFFDAEIVIDAALEQSGKWNQGELLRTKAKIQFAQGRLKNATETYTFLLAVLQVQNKNLGNANKAIKCKRNRDRRLEMEVWHDLTDVYTALSQWCDAEVCLAKSEAINPYSASRWHMTGILYEAKGLHQEAMKSYRKALDIDPNHVPSLISTACVLRKLGGQSSSSSIVRSLLIEALRLDRTNSSAWYNLGLVYKDDLGTSALEAAECFEAAVFLEESCPVEPFR* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2850 724 Gene3D Tetratricopeptide repeat domain 52 417 IPR011990 GO:0005515
Psa6g2850 724 MobiDBLite consensus disorder prediction 36 58 - -
Psa6g2850 724 Gene3D Tetratricopeptide repeat domain 429 720 IPR011990 GO:0005515
Psa6g2850 724 SUPERFAMILY TPR-like 434 550 IPR011990 GO:0005515
Psa6g2850 724 SMART tpr_5 611 644 IPR019734 GO:0005515
Psa6g2850 724 SMART tpr_5 143 176 IPR019734 GO:0005515
Psa6g2850 724 SMART tpr_5 521 554 IPR019734 GO:0005515
Psa6g2850 724 SMART tpr_5 485 518 IPR019734 GO:0005515
Psa6g2850 724 SMART tpr_5 683 718 IPR019734 GO:0005515
Psa6g2850 724 SUPERFAMILY TPR-like 522 694 IPR011990 GO:0005515
Psa6g2850 724 Pfam Tetratricopeptide repeat 612 644 IPR019734 GO:0005515
Psa6g2850 724 ProSiteProfiles TPR repeat profile. 611 644 IPR019734 GO:0005515
Psa6g2850 724 PANTHER PROTEIN NPG1 3 724 IPR043376 -
Psa6g2850 724 PANTHER OS10G0471400 PROTEIN 3 724 - -
Psa6g2850 724 ProSiteProfiles TPR repeat region circular profile. 611 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2850 Psa-Chr6 233481989 233485124 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2850 1 724 Calmodulin-binding Proteins AT4G28600 50.607 0.0 689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2850 6 233481989 233485124 Psa6g2850 6 233481989 233485124 ECH