Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2839 ATGGAGAAATCAGGTGGAGGAATAGGAGTAGTATTGTCGGCGAAAGAGGCATTTGAGAAGCTAGAGAAAGTTGGAGAAGGAACTTATGGGAAGGTATACAGAGCAAGAGAGAAAGCTACTGGGAAGATTGTTGCTCTGAAGAAGACTCGTCTCCATGAGGATGATGAAGGTGTTCCTCCCACCACTCTTCGCGAGGTTTCCATATTGCGAATGCTCTCTCGTGATCCTCATGTTGTTAGGTTATTGGATGTGAAACAAGGTCAGAATAAGGAAGGGAAAACTGTTCTCTACTTGGTTTTTGAGTACATGGATACTGATCTCAAGAAGTTCATCCGTTCTTTTCGCCAAACTGGCGAAAACATCCCATCCCCAACCATCAAAAGCTTGATGTACCAACTTTGCAAGGGTGTTGCTTTCTGCCACGGCCATGGAATCTTGCACAGGGACTTGAAACCTCACAATCTCTTGATGGACCGGAAGTCAACTATGCTCAAAATTGCTGATCTTGGACTTGCCAGAGCGTTTACTGTGCCACTTAAGAAGTACACTCATGAGATTCTAACTCTGTGGTACAGAGCTCCTGAAGTCCTTTTGGGGGCTACCCATTACTCAATGGCAGTGGATATATGGTCTGTTGCGTGCATATTCGTTGAACTTGTCACCAAGCAAGCACTATTTCCTGGTGATTCTGAGCTGCAACAACTCCTCCATATATTCAGGCTGTTGGGGACTCCTAATGAAGAGGTGTGGCCAGGTGTTAGTAAACTAATGAACTGGCATGAGTACCCTCAATGGAACCCTCAAAATCTTGCAAAGGCTGTTCCCAATTTGGAAGAGTCTGGACTGGATCTACTCTCTCAAATGCTCAAGTATGAACCTTCCAAGAGGATTTCGGCAAAGAAAGCTATGGAACACCCTTACTTTGATGACCTGAACAAAACCAATCTCTAG 951 0.4479 MEKSGGGIGVVLSAKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLLDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRQTGENIPSPTIKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKSTMLKIADLGLARAFTVPLKKYTHEILTLWYRAPEVLLGATHYSMAVDIWSVACIFVELVTKQALFPGDSELQQLLHIFRLLGTPNEEVWPGVSKLMNWHEYPQWNPQNLAKAVPNLEESGLDLLSQMLKYEPSKRISAKKAMEHPYFDDLNKTNL* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2839 316 ProSiteProfiles Protein kinase domain profile. 18 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2839 316 PANTHER CELL DIVISION PROTEIN KINASE 12 314 - -
Psa6g2839 316 Pfam Protein kinase domain 18 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2839 316 PANTHER - 12 314 - -
Psa6g2839 316 SUPERFAMILY Protein kinase-like (PK-like) 15 312 IPR011009 -
Psa6g2839 316 Gene3D Transferase(Phosphotransferase) domain 1 106 315 - -
Psa6g2839 316 SMART serkin_6 18 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2839 316 Gene3D Phosphorylase Kinase; domain 1 13 104 - -
Psa6g2839 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Psa6g2839 316 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2839 Psa-Chr6 231957003 231960196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2839 7 316 Core Cell Cycle Gene Families AT1G20930 83.601 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Psa6g2839 Pkinase 4.2e-71 CL0016