Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2788 ATGCATGTCGTGTCGAGTCCTGGAAGATCCGCAATCGTTATTCAGAAAAAAGCTCGCACATATATTTGTGAGAAACAGTACAAGTTATTGCGATTTTCTACCATAGAACTACAAAGGGCTATTAAAGGACAACTTGCAAGACGTCGGTATGAATGCATGAGAGGAGGCCGCATCTTGATAATCCAGAAACAAATCCGCATGTATCTTTCGAGAAGTGCTTATAAACTACCTATTTCAAAGCTGTTTGTATTCAAAACCGGCATGCGAGGAATGCGCTGCTAG 282 0.4149 MHVVSSPGRSAIVIQKKARTYICEKQYKLLRFSTIELQRAIKGQLARRRYECMRGGRILIIQKQIRMYLSRSAYKLPISKLFVFKTGMRGMRC* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2788 93 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 78 IPR027417 -
Psa6g2788 93 Gene3D - 8 58 - -
Psa6g2788 93 Pfam IQ calmodulin-binding motif 9 28 IPR000048 GO:0005515
Psa6g2788 93 Pfam IQ calmodulin-binding motif 58 75 IPR000048 GO:0005515
Psa6g2788 93 Pfam IQ calmodulin-binding motif 34 50 IPR000048 GO:0005515
Psa6g2788 93 PANTHER MYOSIN HEAVY CHAIN 8 92 - -
Psa6g2788 93 ProSiteProfiles IQ motif profile. 30 57 IPR000048 GO:0005515
Psa6g2788 93 PANTHER MYOSIN 8 92 - -
Psa6g2788 93 SMART iq_5 29 51 IPR000048 GO:0005515
Psa6g2788 93 SMART iq_5 9 28 IPR000048 GO:0005515
Psa6g2788 93 SMART iq_5 53 75 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2788 Psa-Chr6 225233020 225233399 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2788 8 91 Myosins gene family AT1G04160 42.353 2.37e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2788 K10357 - gmx:100788123 95.1301