Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2778 ATGGAGTGCAGTTTGCTTGCAATAAATCTGAGAGGCTGTAAACAGCTTTGTTACATTGAAAGTGAGAAGCAATCTAAATCTCTTCGATGGCTTAATTTAAGAGGGTGTTCAAGACTCACTAAGTATTCGGTTGTTTCAGAGGAACTGAAGTACTCTAACTTAGATTGCATTGCAATTGAAGAACTGCCTGACAACATCAACCTCTTACTGAAGTTAAATAAACTCTCATTAAGAGGTAGTAATATTGAAACCTTGCCTGGTAGCATACAATATCTCTCCCTGTTGAGAGCTCTCGACGTAAGCAACTGCAGGAGGCTTCGTTCCTTGCCCAAGCTCTTGTTCTTGCTACAAGACTTGAATGTAAGCAATTGCATTTCCTTAGTAATAGTATCAAATTTAGGAATGACAATGTTGCAAGATTCTTTTGGTAGGCTAAAGAAGAGAACATTGCTGAGACAGATTCAAGAGGAGGAAAAAATGGCTATTCGTCATCAAAACTATTTGGGTAGATTTGAGTTTCATAATTGCATGAAGTTGGATCAGATAGCAGGAAGAACTGTTCTGGAGGAGGCACTTATTAGAATTCAGCTAGCAGCCTACCTGTCATCAAAGTTTGAAGAATGTTATGAAACTGCTGATGAAGTTTCTGATAACTTTCACCCTGAAGATTTTGTACATATATCCCGGCCCTTTTATAGTATTTTAGTGGGAAATGAGATACCATATTGGTTCATGCATAAAAAAACAGACTCCTTGGTCATCATTATTGAACTTTCTCCACTGCTCCATTTAAGGAACAGATTTCTGGGGTTTGCATTCTGCCTTGTTCTTGGAGCATCTGAATCAAACAGGAAGAATATTCGCAGTACTAGTCTTATGGCGGGAAATTTCACAAGAAATTTTCCTTGGAAGGTCTCCTTCGAGTTTTTTGTTTTGTCGGGTATTTCAGGATCTATGGTGAAACAGTGTGGAATTCGACCATTGTATTCTCCATTTGGCATCATGCAAAGCTTAAATGAAGAAGTAAGCATAGAAGCTAAGAGAGCTTATCATGACTTTGAATACAACAGAATTCCAATGGAATACTGGCTTCTTCGCTACTATGCTCATCCTCTTGACCGCCTTGGATTTCCATCAAAACAACCAGGATTTCTGAGTGTCATCATGGAGAATTTGAGGAACCTCCACCACCAACCACGTGATTTGAGGCGTTTAGCCCAACTCTTTCTGAATGACTATTGTTATTTTGGTGAACTCTTAGACAATATCGACATCTTTTCATCCCTGAGAAGTTTGTGGATACATTGTTGCAATATTGAGAGCTTGCCTGCTAGAATCAGGAATCTTTCAAGGCTGGAATATCTTAAATTTTATGACTGCAAGAGGCTGAGGTCTATCTCCAAGCTTCCACCATCCCTTGAAACTTTGCTTGTTGTTAACTGCACATCTCTGGAGACAGTTGAATTTTCTGAGGAATACATCAGGCATGTTTTTTTGGATGGAACTTTTCTCAATGGAATGACACATATGGTGCATGAAAAAGTATCGAGAATACAAGTTACTGATCCAGAAACAAATGTCATAGACTGGTGGTCCATGGAAAAATATGGGCCTTCGAGGGCTAATATTTCTTCAATGTTACTTCACGTCTAG 1653 0.3896 MECSLLAINLRGCKQLCYIESEKQSKSLRWLNLRGCSRLTKYSVVSEELKYSNLDCIAIEELPDNINLLLKLNKLSLRGSNIETLPGSIQYLSLLRALDVSNCRRLRSLPKLLFLLQDLNVSNCISLVIVSNLGMTMLQDSFGRLKKRTLLRQIQEEEKMAIRHQNYLGRFEFHNCMKLDQIAGRTVLEEALIRIQLAAYLSSKFEECYETADEVSDNFHPEDFVHISRPFYSILVGNEIPYWFMHKKTDSLVIIIELSPLLHLRNRFLGFAFCLVLGASESNRKNIRSTSLMAGNFTRNFPWKVSFEFFVLSGISGSMVKQCGIRPLYSPFGIMQSLNEEVSIEAKRAYHDFEYNRIPMEYWLLRYYAHPLDRLGFPSKQPGFLSVIMENLRNLHHQPRDLRRLAQLFLNDYCYFGELLDNIDIFSSLRSLWIHCCNIESLPARIRNLSRLEYLKFYDCKRLRSISKLPPSLETLLVVNCTSLETVEFSEEYIRHVFLDGTFLNGMTHMVHEKVSRIQVTDPETNVIDWWSMEKYGPSRANISSMLLHV* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2778 550 Pfam C-JID domain 236 330 IPR045344 -
Psa6g2778 550 Gene3D Ribonuclease Inhibitor 3 172 IPR032675 -
Psa6g2778 550 Gene3D Ribonuclease Inhibitor 374 497 IPR032675 -
Psa6g2778 550 SUPERFAMILY L domain-like 4 495 - -
Psa6g2778 550 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 392 486 - -
Psa6g2778 550 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 5 181 - -
Psa6g2778 550 PANTHER - 5 181 - -
Psa6g2778 550 PANTHER - 392 486 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2778 5 127 WRKY Transcription Factor Family AT4G12020 34.127 3.37e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2778 - - mtr:MTR_1g052170 532.717