Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2771 ATGCATGATGATCATCAAATTTCTTTTGGAATGATGCCATCTTCATCTTCATCCTCCATCCCTGGGAACTACTTAAGCAAGGATTCAAGTGCTTTTGATTTAGGTGAATTGGATCAAGCTTTTTTCTTGTATCTCGATGGACAATCACAAACACAAGCTGATCCTTCCACTCTTCAAGATCAAGGACAGAATTCATCATCATCAGCAATGAGGCCACCACCAACTCTTAACATTTTCCCATCTCAACCAATGCATGTATCACCACCACCACCACCCTCTAATTCAAAGGCTAGCATGGGATTAACTTCTCCACAAACAAGTGGTTCCAAAATAATATCTCAACCTACCATGGAGTTGGCAAACCAACGAAATCAAACCCCTTCTGCACCTGCACCACCAAAACCTGTCAAGAGAGAGAATAATCGGAGGGGTACAACTTCAAGTTCTGAACATGAAGGACCAAAAACACCGGATCCTAAGACTCTGAGAAGACTTGCTCAGAATAGAGAGGCAGCAAGGAAAAGCAGGCTTAGGAAAAAGGCTTATGTTCAGCAGCTAGAATCAAGTAGGATTAAGCTTAATCAGCTTGAACAAGAATTACAGCGTGCTAGAGCTCAAGGCGTTTTAATGGGCGGAGGTGCAATTTTGGGAGGAGATCAAGGCATACCAATTTCTATGAACAACATTACCTCAGAGGCTGCAATGTTTGATTTGGAATATGGGAGATGGTTAGAGGAGCACCTTAGGCTTGTATGTGAGCTAAGAGCAGCAGTAGATGAACACCTGCATGAAAATGAGCTTAGGTTATATGTGGAAAATTGTTTGGCTCACTATGATCAAGTAATTAACCTCAAAAACATTTTAGCTAGAACAGATGTTTTTCATCTTGTTTTCGGAATGTGGAAAACACCAGCCGAGCGTTGCTTCATGTGGATCGGCGGATTCAGACCATCTGAACTCATTAAGATAATTGCAAGTCAAATTGAGCCTCTTACTGAGCATCAAATCCTGGGAATATGTGGGTTGCAACAATCAACACAAGAAGCAGAAGAAGCTCTTTCCCAAGGGCTTGATGCACTCAACCATTCTCTTTCAGACACCATAACATCAGACTCTTTGAGCCATCCACCTAACATGGCTAACTACATGGGACAGATGGCTCTTGCCATGAACAAGCTTTCAACTCTTGAAAGTTTTGTGAGACAGGCAGATAATCTGAGGCACCAAACAATTCATCGTCTGCACCAGTTGTTAACAATTCGTCAAGCTGCAAGATGTTTGGTTGCAATGTCAGAGTATTTTCATCGTCTTCGAGCATTGAGTACTCTCTGGTTGACCCGCCCTCGCCAAGAATAG 1356 0.4248 MHDDHQISFGMMPSSSSSSIPGNYLSKDSSAFDLGELDQAFFLYLDGQSQTQADPSTLQDQGQNSSSSAMRPPPTLNIFPSQPMHVSPPPPPSNSKASMGLTSPQTSGSKIISQPTMELANQRNQTPSAPAPPKPVKRENNRRGTTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQLEQELQRARAQGVLMGGGAILGGDQGIPISMNNITSEAAMFDLEYGRWLEEHLRLVCELRAAVDEHLHENELRLYVENCLAHYDQVINLKNILARTDVFHLVFGMWKTPAERCFMWIGGFRPSELIKIIASQIEPLTEHQILGICGLQQSTQEAEEALSQGLDALNHSLSDTITSDSLSHPPNMANYMGQMALAMNKLSTLESFVRQADNLRHQTIHRLHQLLTIRQAARCLVAMSEYFHRLRALSTLWLTRPRQE* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2771 451 MobiDBLite consensus disorder prediction 96 127 - -
Psa6g2771 451 MobiDBLite consensus disorder prediction 51 71 - -
Psa6g2771 451 Gene3D - 159 208 - -
Psa6g2771 451 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 158 202 IPR004827 GO:0003700|GO:0006355
Psa6g2771 451 ProSiteProfiles DOG1 domain profile. 233 447 IPR025422 GO:0006351|GO:0043565
Psa6g2771 451 Coils Coil 179 206 - -
Psa6g2771 451 MobiDBLite consensus disorder prediction 136 163 - -
Psa6g2771 451 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 54 450 - -
Psa6g2771 451 MobiDBLite consensus disorder prediction 84 163 - -
Psa6g2771 451 SUPERFAMILY Leucine zipper domain 160 202 IPR046347 GO:0003700|GO:0006355
Psa6g2771 451 SMART brlzneu 156 209 IPR004827 GO:0003700|GO:0006355
Psa6g2771 451 MobiDBLite consensus disorder prediction 1 21 - -
Psa6g2771 451 CDD bZIP_HBP1b-like 160 212 - -
Psa6g2771 451 Pfam bZIP transcription factor 160 198 IPR004827 GO:0003700|GO:0006355
Psa6g2771 451 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 163 178 IPR004827 GO:0003700|GO:0006355
Psa6g2771 451 PANTHER TRANSCRIPTION FACTOR TGA9 54 450 - -
Psa6g2771 451 Pfam Seed dormancy control 251 326 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2771 Psa-Chr6 221605392 221612237 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2771 22 451 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 62.838 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa6g2771 DOG1 5.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2771 K14431 - gmx:100799713 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2771 6 221605392 221612237 Psa6g2771 6 221605392 221612237 ECH