Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2761 ATGCAATACCGTTCCGCTTTAGTTATCAATCACCGTTCCGCTTATGTCTCAGATTTTTCAGGGTTGAAATCTATTGTGAGTCTTAACATATCAGGAAATTATTTCAGGGTTCTGTTACAGATGTTTTTTGTGTTGGTGTTGTTTCTGATTATGACTTGTCCAGCCACACCTTCTGGTTATGACTTGTTTCTGATTACGAAGGTACTGCATGATGGGCAAAGGAGTTGGCCAAACGATCTTAATTCTGCAAAGACATTGGTGAAAAACTTTCAGAATGGAAGCAGGCTGGATTATCCTCATCTCACTAAGGATCTTGCAAGGAATAGAGACTCTATGGGGGATGCTGCCATTCAGGGCCGATTGAACCATGGCTTGTGCAAATATATTGCTGTAGGAACATATGCCCGTGGTAATGAACTCCAAGTTCCTGATTGTACCAAATATTTCATGGAAAATTTGCAGAGGTTGTCTGATGCTAATTACGTTCCTCAAAGGAGGATGTTTTGTATGCAAGAGTTCGTACAACTGGTGTTGTGGAGATCCAGTTCAGCCCTGTTGGAGAAAATAAAAGAAGTGGTGAAGTCTATAGACTCTTTGATGTTCCAGTGGAAACGTAATCGCCGTGCATTGGCATATTCAACTGTTGGAACTCTTGACTACATGGCTCCAGAAGTTTTGCTCAAGAAGGGGTATGGAATAGAGTGTGATTGGTGGTCTCTTGGGGCAATCATGTATGAGATGCTTGTTGGATATACTCCATTTTGTTCTGATGATCCAAGAATGACCTGCCGGAAGATTGTGAATTGGAGAGCATGCCTGAAATTCCCCGAAGAACCTAAACAGGATGTTTGA 852 0.4178 MQYRSALVINHRSAYVSDFSGLKSIVSLNISGNYFRVLLQMFFVLVLFLIMTCPATPSGYDLFLITKVLHDGQRSWPNDLNSAKTLVKNFQNGSRLDYPHLTKDLARNRDSMGDAAIQGRLNHGLCKYIAVGTYARGNELQVPDCTKYFMENLQRLSDANYVPQRRMFCMQEFVQLVLWRSSSALLEKIKEVVKSIDSLMFQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGIECDWWSLGAIMYEMLVGYTPFCSDDPRMTCRKIVNWRACLKFPEEPKQDV* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2761 283 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 187 273 - -
Psa6g2761 283 PANTHER SERINE/THREONINE-PROTEIN KINASE 187 273 - -
Psa6g2761 283 SMART serkin_6 63 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2761 283 Gene3D - 126 165 IPR011025 GO:0007165
Psa6g2761 283 SUPERFAMILY Transducin (alpha subunit), insertion domain 133 163 IPR011025 GO:0007165
Psa6g2761 283 ProSiteProfiles Protein kinase domain profile. 1 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2761 283 Pfam Protein kinase domain 211 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2761 283 Gene3D Transferase(Phosphotransferase) domain 1 166 282 - -
Psa6g2761 283 SUPERFAMILY Protein kinase-like (PK-like) 209 277 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2761 Psa-Chr6 220208996 220212112 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2761 200 280 AGC Kinase Gene Family AT5G09890 90.123 9.36e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Psa6g2761 Pkinase 3.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2761 K08790 - sind:105159165 172.17