Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2715 ATGCCTCTTCTCTCAAGCCGTGGCAGACGGTCACAGAGAAACAAGAATATCAGAACAGAAGGTGGAACAAGCAACAACAAACTAAGCCAAAGCAGTGAAGAGGACAATGGTGAAGCGACCCCTCTCTCTCCTCTGCTGCGTTTTCTGCTGCGTAGTGGAGGTCTCGTACGGAGGATGCTTGGAGATTTTGTCTTCATCCTAGCTTGGTGGTCCCCTGCTTCTTCTCTTCATCCTAATCCATTTACCGGCCTTGGTGCGATTCGTTTGGAGGCAAAATGTTGTGGCATTGACTCTGTGTATCGTGTTGCTCTTGATGACGGTTTAGGTTATATTGCAGTGAAAACAATAAGGGGGAGTAGCAGAAGGTTAGACCAGGAGCTTGTGGATTCATTTCTTGCAGAAGTTGAAATACTAAGAAAAATTCGGCATAACAACATTGTGAAGTGGATGTGTTGCGTCTCAAGTGATGATTTGCTACTACTTGCATATCATGAACATCAGAGTCTTGATAGGTGGTTGTATAACGATTGCTCGCCACCTATTGTTCACTGGGACGTGAAAGCAAGTAACATTCTTTTGGATTCACAATTCAACACTAAAGTTGTTGATTTTGGTCTCGCCAAGATACTGTTCAAACCAGAAGAACTTGCCACCATGTCAGTTGTGGCTGGCACATTTGGATATATTGCTCCGGAATATGCTCAATCAATTAGAGTCAACGAGAAGATAGATGTTTACAGCTTTGGAGCAGTTCTATTGGAACTGACAACTGGAAAAGAAGTTAATCCTGGATACGAATACTTGTCGCTTGCAGAATAG 819 0.4347 MPLLSSRGRRSQRNKNIRTEGGTSNNKLSQSSEEDNGEATPLSPLLRFLLRSGGLVRRMLGDFVFILAWWSPASSLHPNPFTGLGAIRLEAKCCGIDSVYRVALDDGLGYIAVKTIRGSSRRLDQELVDSFLAEVEILRKIRHNNIVKWMCCVSSDDLLLLAYHEHQSLDRWLYNDCSPPIVHWDVKASNILLDSQFNTKVVDFGLAKILFKPEELATMSVVAGTFGYIAPEYAQSIRVNEKIDVYSFGAVLLELTTGKEVNPGYEYLSLAE* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2715 272 Gene3D Phosphorylase Kinase; domain 1 91 159 - -
Psa6g2715 272 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Psa6g2715 272 MobiDBLite consensus disorder prediction 17 38 - -
Psa6g2715 272 SUPERFAMILY Protein kinase-like (PK-like) 98 268 IPR011009 -
Psa6g2715 272 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 95 175 - -
Psa6g2715 272 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 174 272 - -
Psa6g2715 272 SMART serkin_6 98 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2715 272 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 174 272 - -
Psa6g2715 272 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 95 175 - -
Psa6g2715 272 MobiDBLite consensus disorder prediction 1 38 - -
Psa6g2715 272 ProSiteProfiles Protein kinase domain profile. 1 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2715 272 Pfam Protein kinase domain 181 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2715 272 Gene3D Transferase(Phosphotransferase) domain 1 160 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2715 Psa-Chr6 211123645 211125114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2715 95 272 Receptor kinase-like Gene Family AT5G25930 48.598 5.70e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa6g2715 Pkinase 9.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2715 - K00924 gmx:100785907 234.187