Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2707 ATGGAAAAAAAAATCACTGATAGAGAAACACATGACTTAATGAATGTTGATTCTTTCTCTCAACTTCCCTTCATCCGCCCTCCACCTAAAGAAAAAGGCATCCGCCTCTTCGGTATCGAGTTCGGCGGCCGAGCAGCCGCCGACGACATCGACGACTCCTTGGAGTCTCTCGAAACAACATTCGAGGTTGAAAACCACAACACCATCAAAGACACTAACCCCAACACCACCAACAGCAGCAACAGCGGCAACAACAACATGGAAAACAACAGAAGATTTGAATGTCATTACTGTTGTAGAAACTTTCCAACTTCACAAGCTTTAGGTGGTCATCAAAACGCCCACAAAAGAGAACGTCAACATGCAAAACGACAACACCTTCAATCAACTATGGTACATGCTACATCTTTCTCTGATCCACATCTCTACCATCACCACCATCATCACCAACAACAACAACATCCTTTCTACAGATTCACATCATCCTCACCATCCTCATTATCCTCATCACCTTCTTATCCAACATGGAACTCAAACTCAACCACTGCAAGATTCTATAACCATCCAACTTCTTCATACTCTCAACAACCTATTAATGGTAGTCCTTTAGCTTTCTGGAGAATCCCAAACGGCACCGTTCAGAGTAACCCTAGTTTCAACCATGAACGTCCTTCGCCTTTACTTGCTTCCGAGGAAAGAGCGAATCCGTCACAGGACGGACACGCACATGGAGTTCGTTCTAATGTTTCGCATAATCGCTACGTTTATGATACTAAACGTAGCGACCATGTTAGTTTAGATCTTCATCTTTAA 813 0.4342 MEKKITDRETHDLMNVDSFSQLPFIRPPPKEKGIRLFGIEFGGRAAADDIDDSLESLETTFEVENHNTIKDTNPNTTNSSNSGNNNMENNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRQHLQSTMVHATSFSDPHLYHHHHHHQQQQHPFYRFTSSSPSSLSSSPSYPTWNSNSTTARFYNHPTSSYSQQPINGSPLAFWRIPNGTVQSNPSFNHERPSPLLASEERANPSQDGHAHGVRSNVSHNRYVYDTKRSDHVSLDLHL* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2707 270 PANTHER ZINC FINGER PROTEIN GIS 1 270 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Psa6g2707 270 MobiDBLite consensus disorder prediction 108 129 - -
Psa6g2707 270 ProSiteProfiles Zinc finger C2H2 type domain profile. 93 120 IPR013087 -
Psa6g2707 270 PANTHER ZINC FINGER PROTEIN GIS 1 270 - -
Psa6g2707 270 ProSitePatterns Zinc finger C2H2 type domain signature. 95 115 IPR013087 -
Psa6g2707 270 MobiDBLite consensus disorder prediction 218 256 - -
Psa6g2707 270 SUPERFAMILY beta-beta-alpha zinc fingers 89 121 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2707 Psa-Chr6 210739669 210741729 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2707 1 270 C2H2 Transcription Factor Family AT3G58070 37.847 1.40e-42 144