Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2691 ATGCCGTTCAAGAGGTTTGTTGAGATCGGGAGAGTTGCACTTGTCAACTACGGGAAAGACTATGGAAAGCTAGTTGTTATCGTCGATGTTATCGACCAAACTAGGGCCCTTGTTGATGCACCTGACATGGAGAGGATCCCAATCAATTTTAAGAGGCTTTCTCTTACTGATATCAAGATTGATATCAAGAGAGTCCCTAAGAAGAAGGATCTCATCAAGGCCATGGAAGCCGCAGATGTGAAGAACAAGTGGGAGAAAAGCTCATGGGGAAGGAAACTGATTGTTAGGAAGAGAAGGGCTGCACTGAATGATTTTGACAGGTTCAAGATTATGTTGGCAAAGATTAAGAGAGCTGCTAGTGTCAGGCAAGAACTTGCCAAGCTAAAGAAGACTGCAGCTTAG 402 0.4403 MPFKRFVEIGRVALVNYGKDYGKLVVIVDVIDQTRALVDAPDMERIPINFKRLSLTDIKIDIKRVPKKKDLIKAMEAADVKNKWEKSSWGRKLIVRKRRAALNDFDRFKIMLAKIKRAASVRQELAKLKKTAA* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2691 133 SUPERFAMILY Translation proteins SH3-like domain 5 93 IPR008991 -
Psa6g2691 133 PANTHER 60S RIBOSOMAL PROTEIN L14 1 133 IPR039660 GO:0003723|GO:0003735
Psa6g2691 133 Pfam Ribosomal protein L14 45 117 IPR002784 GO:0003735|GO:0005840|GO:0006412
Psa6g2691 133 PANTHER RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED 1 133 - -
Psa6g2691 133 Gene3D - 1 84 IPR014722 -
Psa6g2691 133 Gene3D - 92 127 - -
Psa6g2691 133 CDD KOW_RPL14 7 79 IPR041985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2691 Psa-Chr6 208565933 208566930 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2691 1 133 Cytoplasmic Ribosomal Protein Gene Family AT2G20450 86.466 1.21e-77 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2691 K02875 - gmx:100499889 232.646