Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2683 ATGGCTAGCAGCAATAAAGAGAAGGAGGAGAAAGACATTGAGTTTATGTTTAATGAGGAGGATGTAGAGGAGGAACATGATATTGAAACTGACGGTGGTAGCAGTGATGATAATTATGATGACGATGATGACGGAAATCATGCATTTCAACCTCACTCTTTCACTTCCAACCAATGGCCTCAAAGTTACAAAGAGACTACAGATTCTTACACAATTGCTACAGCTCCAAGTTTTGGATCCATTCTAAAAGGACCAAGTTTTATTTATTCAAGTTTTGGCAATCGTTCAAAGAGTAACTCAGACATAGATGGAAAATCTCCCTTTCTATCAGCTTATGAGAAAGATTCCATGCAAAATCTTGCTGGAGAAATGCCTCTTGGTCATGGTTGCAGCTTCACTCAAACAATTTTCAATGGGATTAATGTGATGGTTGGAGTTGGCCTTATATCTGCTCCTTATACAGTGAAACAAGCTGGTTGGGCGAGCATGTTGGTGATGACACTTTTTGCAGTTGTTTGTTGTTATACAGCCATGCTTATGAGACAATGCTTTGAAAGTAGAGAAGGACTCACTAGCTACCCAGATATAGGAGAAGCTGCGTTTGGTAGATATGGCCGTGTCTTTGTATCTATCATTTTGTACACTGAGTTATATTCATATTGTGTGGAATTCATCACCTTGGAAGGAGATAACCTCACTAGTCTGTTTCCTGGAACATCCTTAGATTTAGGTGGTCTCCATTTAGATTCCATGCACTTATTTGGAGTTCTTACTGCACTTATTGTTCTCCCTACTGTTTGGTTGAAGGATCTCCGAATAATCTCGTATCTATCAGTTGGAGGGATTGTAGCAACAATATTGATTATTATTTGCGTGGTATCGGTTGGGACAACCGTTGGATTCCATCATACTGGTCAAGTGGTGAATTGGAGTAGCATTCCATTTTCTATTGGTGTCTATGGGTTTTGCTTTGCAGGACATTCAGTTTTTCCAAATATATACCAGTCTATGGCTGACAAAAAACAGTATACCAGAGCATTGATAACATGTTTTGCTTTGTGTATATTGATATACGGAAGCGTTGCAGTCATGGGATTTCTCACATTTGGCGACAACACTTTGTCTCAGATAACATTGAATATGCCAGCAGGTGCATTTGCTTCCAAAGTTGCATTGTGGACAACAGTAATTAACCCATTCACTAAATATCCTTTTTGCATAGAATGA 1227 0.3904 MASSNKEKEEKDIEFMFNEEDVEEEHDIETDGGSSDDNYDDDDDGNHAFQPHSFTSNQWPQSYKETTDSYTIATAPSFGSILKGPSFIYSSFGNRSKSNSDIDGKSPFLSAYEKDSMQNLAGEMPLGHGCSFTQTIFNGINVMVGVGLISAPYTVKQAGWASMLVMTLFAVVCCYTAMLMRQCFESREGLTSYPDIGEAAFGRYGRVFVSIILYTELYSYCVEFITLEGDNLTSLFPGTSLDLGGLHLDSMHLFGVLTALIVLPTVWLKDLRIISYLSVGGIVATILIIICVVSVGTTVGFHHTGQVVNWSSIPFSIGVYGFCFAGHSVFPNIYQSMADKKQYTRALITCFALCILIYGSVAVMGFLTFGDNTLSQITLNMPAGAFASKVALWTTVINPFTKYPFCIE* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2683 408 Gene3D Amino acid/polyamine transporter I 129 401 - -
Psa6g2683 408 MobiDBLite consensus disorder prediction 16 43 - -
Psa6g2683 408 MobiDBLite consensus disorder prediction 1 15 - -
Psa6g2683 408 PANTHER OS05G0424000 PROTEIN-RELATED 35 407 - -
Psa6g2683 408 PANTHER AMINO ACID TRANSPORTER AVT1A 35 407 - -
Psa6g2683 408 MobiDBLite consensus disorder prediction 1 45 - -
Psa6g2683 408 Pfam Transmembrane amino acid transporter protein 129 404 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2683 Psa-Chr6 208107519 208109458 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2683 1 403 Amino Acid or Auxin Permease AAAP Family AT2G41190 58.216 3.18e-173 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2683 K15015 - gmx:100790344 604.364