Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2675 ATGGCAAAGAGGAAGAGCTGGTTTGGATGGGTGAAAAGCCTATTCATTTCTGAGTCAAAGTGCAAAAACCAGAAGAAATGGGGCTGGAGATTAGGAAGGATTAAACAGAAGCAATACCCTACAATTACAGCTTCAAAAAGGACATTGATTGAAGCAAATGCAGAACAGAGAAAGCATGCTTTAGCTGTGGCTATTGCAACAGCATCTGCTGCTGAGGCTGCAATCGCTGCTGCACATGCTGCTGCTGAGGTTGTCAAACTCACAAGTGGTGCCTCTCGTTCGAATTCATATCTCTCCAAGGGAGACAGAAGTTTGGCTGCCATCAAGATTCAAAGTGTTTATCGTGCACATCTCGCTAGAAAAGCATTAAGAGCATTGAAGGGAGTTATAAGACTACAGGCCATAATTCGCGGTCAAGCTGTTAGGCGTCAAGTGTTCAGATCTTTGAAGAGTGTTCCCTCAAATGCAAAAACTCAAAAGGAAAACCAGGACAGAAGCAGCCATACTGAAGAAGAAAACTACAAAAATGAACAGATAAAACTGTTTCCAAAGGAAAAGAAAAAGATAGAAGAGAATGAACTTAAGGCTGAATGCTATAGTCAAAAAACATGGAATTGTAGCTCACACTCAAAGGAAGGCATTGAAGCTATATGGTTAAGAAAGCAAGAGGCTATTGTCAAAAGAGACCGCATGAGACAATACTCTTCTTCACAAAAGGAGAGAACATTTTCTCAAAGGGTGGAAGAATTTGGAGGAGATAGTTGCCGTACGTTAGAAGAGTGGTTACATAAAGAAATAAGTGATTGGGATGTTCTTTGTAAACCATCTCATCTTTCAAATATCACACTAAGAAATGAAGTACAAGAAGAATTGAGTTCAAAAATTTCAGTCCAAAGAAAATCATTTTCTCATGTAAAAAGAAGTTCAATTGGTGATGAGAGTCCCATGCCAAATTCTCCTGTTTTTCCTAAATACATGTCTTTGACTGAGTCTAGCAAAGCAAAAGTAAGGTCTATGAGCACACCAAGGCTAAGAGCAGGATTTTTGGATATGTGTTCCTATCAGAATGAGCACCAATGCATGAATTTCTGA 1092 0.3947 MAKRKSWFGWVKSLFISESKCKNQKKWGWRLGRIKQKQYPTITASKRTLIEANAEQRKHALAVAIATASAAEAAIAAAHAAAEVVKLTSGASRSNSYLSKGDRSLAAIKIQSVYRAHLARKALRALKGVIRLQAIIRGQAVRRQVFRSLKSVPSNAKTQKENQDRSSHTEEENYKNEQIKLFPKEKKKIEENELKAECYSQKTWNCSSHSKEGIEAIWLRKQEAIVKRDRMRQYSSSQKERTFSQRVEEFGGDSCRTLEEWLHKEISDWDVLCKPSHLSNITLRNEVQEELSSKISVQRKSFSHVKRSSIGDESPMPNSPVFPKYMSLTESSKAKVRSMSTPRLRAGFLDMCSYQNEHQCMNF* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2675 363 PANTHER IQ-DOMAIN 5-RELATED 1 358 - -
Psa6g2675 363 PANTHER IQ-DOMAIN 12 1 358 - -
Psa6g2675 363 SMART iq_5 102 124 IPR000048 GO:0005515
Psa6g2675 363 Gene3D - 93 152 - -
Psa6g2675 363 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
Psa6g2675 363 Pfam Protein of unknown function (DUF4005) 309 345 IPR025064 -
Psa6g2675 363 Pfam IQ calmodulin-binding motif 106 124 IPR000048 GO:0005515
Psa6g2675 363 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Psa6g2675 363 MobiDBLite consensus disorder prediction 161 177 - -
Psa6g2675 363 MobiDBLite consensus disorder prediction 151 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2675 Psa-Chr6 207508824 207511174 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2675 1 350 IQD Protein Family AT5G03960 44.474 3.73e-63 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2675 - - cam:101513369 487.263