Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2663 ATGGATGGTTGCTGGTTTCATAAGTTCAAGTCAAACAAGGACAAAATGCAGTCTTCAAAAAACAAGGAAACTGCAAGCGTTGTAAAAGAAAGGTCAAAGCCCCCAACAAATGAAGAAGCTCCTTCAAATGTCACCCAACAGAAAGTTGCAGCTGCAAAGCAGTACATAGAAAACCATTATAAGAAGCAGATGAAGAACCTGCAGGAGAGAACAGAACGGCGTAATATGCTCGAAAAAAAGTTGGCTGACTCTGAAGTCTCCGAGGAAGAGCAGAACAACTTGCTTAGGTTTTTTGAGAAAAGAGAGAGGGAATACATGCGACTTCAGAGGCATAAGATGGGTGCTGATGATTTTGAGCCCCTGACTATGATAGGGAAGGGTGCATTTGGAGAGGTCAGAATCTGCCGAGAGAAGGCAACTGGTAATGTATATGCTATGAAGAAGCTTAAGAAATCAGAGATGCTTCGCCGAGGCCAGGTTGAACATGTAAAAGCAGAGAGGGACCTACTTGCAGAAGTTGACAGCAATTACATTGTAAAGCTTTATTGTTCCTTTCAAGACGAAGATTGTTTATATCTTATAATGGAGTATCTTCCTGGTGGCGATATGATGACATTACTCATGCGGAAGGATATACTGACAGAATATGAGGCCAGGTTCTATGTTGGGGAGACTGTCCTAGCTATAGAGTCGATTCATAAACATAATTATATTCATAGAGATATCAAGCCTGATAACTTGCTGTTAGATAGACATGGTCACATGAAATTATCAGACTTTGGATTATGCAAACCACTAGACTGCAGTAATCTTCAGGAAAAGGACTTCTCTACTGGAATCAACAGAAGTGGAGCCCTTCAGAGCAATGGACAACCTGTGGCTCCTAAAAGGACTCAGCAGGAGCAGCTGCTGCATTGGCAGAAAAATAGGCGAATGCTTGCCTATTCTACAGTAGGAACACCTGACTATATTGCCCCTGAAGTTCTCCTGAAGAAAGGATATGGCATGGAATGTGATTGGTGGTCTTTGGGAGCTATAATGTATGAAATGCTAGTGGGATATCCACCCTTTTATTCAGATGAACCAATGTTGACTTGTAGAAAGATAGTCAATTGGAGAAATTATTTAAAATTTCCAGAAGAAGCTAAACTATCAGCAGAGGCAAAGGATCTTATTAGTAGACTTCTATGTAATGTGGAACAGAGGCTTGGAACCAGAGGTGCTGATGAAATAAAGGCTCACCCATGGTTCAAAGGTGTTGAATGGGATAAGTTGTACCAAATGAAAGCTGCTTTTATTCCTGAGGTCAATGATGAATTGGATACTCAAAATTTTGAGAAATTTGAAGAGGTGGACCACCAATCTCAACCTTCCTCAAAATCAGGCCCATGGAGAAAGATGCTGTCATCTAAGGATGTTAACTTCGTTGGGTACACATATAAGAACTATGAAATCGTGAATGATAATCATCTATCTGGAATGGCCGAACTGAAGAAGAAGAGCACAAAATCTAAACGGCCATCTATTAAGACCCTATTTGATGATGATTCGGCTACGACTGCCAATCAACCTGGCCAAGGGAGCTACTCAACAGGAAGTTCCAGAGGAAAGTGA 1614 0.412 MDGCWFHKFKSNKDKMQSSKNKETASVVKERSKPPTNEEAPSNVTQQKVAAAKQYIENHYKKQMKNLQERTERRNMLEKKLADSEVSEEEQNNLLRFFEKREREYMRLQRHKMGADDFEPLTMIGKGAFGEVRICREKATGNVYAMKKLKKSEMLRRGQVEHVKAERDLLAEVDSNYIVKLYCSFQDEDCLYLIMEYLPGGDMMTLLMRKDILTEYEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRHGHMKLSDFGLCKPLDCSNLQEKDFSTGINRSGALQSNGQPVAPKRTQQEQLLHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMLTCRKIVNWRNYLKFPEEAKLSAEAKDLISRLLCNVEQRLGTRGADEIKAHPWFKGVEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVDHQSQPSSKSGPWRKMLSSKDVNFVGYTYKNYEIVNDNHLSGMAELKKKSTKSKRPSIKTLFDDDSATTANQPGQGSYSTGSSRGK* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2663 537 ProSiteProfiles Protein kinase domain profile. 118 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2663 537 PANTHER SERINE/THREONINE-PROTEIN KINASE 40 526 - -
Psa6g2663 537 Gene3D Transferase(Phosphotransferase) domain 1 202 276 - -
Psa6g2663 537 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Psa6g2663 537 MobiDBLite consensus disorder prediction 12 47 - -
Psa6g2663 537 SUPERFAMILY Protein kinase-like (PK-like) 94 470 IPR011009 -
Psa6g2663 537 Gene3D Phosphorylase Kinase; domain 1 88 201 - -
Psa6g2663 537 MobiDBLite consensus disorder prediction 513 537 - -
Psa6g2663 537 ProSiteProfiles AGC-kinase C-terminal domain profile. 418 490 IPR000961 GO:0004674|GO:0005524|GO:0006468
Psa6g2663 537 Gene3D Phosphorylase Kinase; domain 1 436 446 - -
Psa6g2663 537 MobiDBLite consensus disorder prediction 497 537 - -
Psa6g2663 537 Gene3D Transferase(Phosphotransferase) domain 1 316 435 - -
Psa6g2663 537 CDD STKc_NDR_like 116 481 - -
Psa6g2663 537 Coils Coil 60 80 - -
Psa6g2663 537 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 40 526 - -
Psa6g2663 537 SMART pkinase_C_6 418 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
Psa6g2663 537 MobiDBLite consensus disorder prediction 12 36 - -
Psa6g2663 537 Pfam Protein kinase domain 120 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2663 537 SMART serkin_6 118 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2663 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Psa6g2663 537 MobiDBLite consensus disorder prediction 497 512 - -
Psa6g2663 537 Pfam Protein kinase C terminal domain 436 480 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2663 Psa-Chr6 206307461 206314625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2663 23 523 AGC Kinase Gene Family AT4G14350 82.505 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Psa6g2663 Pkinase 1.8e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2663 K08790 - gmx:100783095 971.074