Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2661 ATGGATCATGTTATTGGTGGAAAATTCAAACTTGGGAGGAAGATTGGGGGTGGATCATTTGGAGAGCTTTACTTGGGTGTGAATGTACAAACTGGAGAGGAAGTTGCTGTCAAGCTGGAACCTTCGAAGACCAAGCATCCTCAACTTCACTATGAGTCAAAATTGTACATGCTTCTTCAAGGGGGAACGGGTATTCCCCATTTAAAATGGTATGGAGTTGAGGGTGACTACAATGCAATGGCAATTGACCTCCTTGGACCAAGTCTTGAAGACTTGTTTAACTATTGCAATAGGAAATTGTCTCTGAAAACAGTTCTGATGCTTGCAGATCAGCTACTAAACAGAGTTGAGTACATGCACTCCCGGGGTTTCCTGCACCGTGATATAAAGCCTGACAACTTTTTAATGGGCTTAGGCCGCAAAGCAAATCAGGTATACATAATTGATTATGGCCTTGCAAAAAAGTATCGAGATCTTCACACGCACAAGCATATACCATACAGGGAAAACAAAAACCTCACTGGAACTGCCCGGTATGCGAGTGTTAATACCCATCTGGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCACTTGGTTATGTGCTCATGTACTTTTTGAGAGGAAGTCTCCCTTGGCAAGGTTTGAGAGCTGGCAATAAAAAACAAAAATACGACAAAATAAGTGAAAAGAAGATGCTTACTCCTATAGAGGTTTTGTGCAAGTCACATCCATTGGAATTTACATCATACTTCCATTATTGCCGGTCGCTGCGGTTTGAAGATAAGCCTGATTATTCCTATCTCAAGAGACTCTTCCGTGACCTATTCATCCGAGAAGGTTATCAGTTTGATTATGTGTTTGATTGGACAATATTGAAATATCCACAAATTGGATCCAGTTCCAAAGCCCGACCAAGTGGGAAACCAGTCATAAATCCAGGACAATCTGGAGAGAGAATCGAACGGCCTTCAGGTGGACCAGAGGTACGAGATAGATTCTCAGGTGTAGTCGAGGCATTTGCAAGAAGGAATGTGTCTGGGCATGGTCTGCATGGTGATCATTCCAAGCATAGGTCAAAGGATGACGGACCATCTTCTAAAGACGCGCAAGTTGATTCTGAGAGACCCCGTAGCTCTTCTCGTCATGGCAGTTCTTCAAAAAGGCCTGTCTTATCAAGCAGCCGTCCCAACTCTTCTGGTGAACCGAGTGAAAGCCGCCGCCTGGTCATGAGCAGTAGCCGACTATCTACTACTCAGAGAACTCAACCAGGTTTGGAGTCTAAAACATCATCATTTAATCGTGCTTCTGGGACAAGAGGTGGCCGTGATGATACACTCAGGAGCTTTGAACTCCTATCACTTGGTACAGGAAAAAGGAAATGA 1386 0.4372 MDHVIGGKFKLGRKIGGGSFGELYLGVNVQTGEEVAVKLEPSKTKHPQLHYESKLYMLLQGGTGIPHLKWYGVEGDYNAMAIDLLGPSLEDLFNYCNRKLSLKTVLMLADQLLNRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLHTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLRAGNKKQKYDKISEKKMLTPIEVLCKSHPLEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSKARPSGKPVINPGQSGERIERPSGGPEVRDRFSGVVEAFARRNVSGHGLHGDHSKHRSKDDGPSSKDAQVDSERPRSSSRHGSSSKRPVLSSSRPNSSGEPSESRRLVMSSSRLSTTQRTQPGLESKTSSFNRASGTRGGRDDTLRSFELLSLGTGKRK* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2661 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Psa6g2661 461 MobiDBLite consensus disorder prediction 346 461 - -
Psa6g2661 461 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Psa6g2661 461 MobiDBLite consensus disorder prediction 384 439 - -
Psa6g2661 461 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2661 461 Gene3D Transferase(Phosphotransferase) domain 1 1 321 - -
Psa6g2661 461 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 448 - -
Psa6g2661 461 MobiDBLite consensus disorder prediction 303 330 - -
Psa6g2661 461 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Psa6g2661 461 SMART serkin_6 9 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2661 461 PANTHER CASEIN KINASE-RELATED 1 448 - -
Psa6g2661 461 MobiDBLite consensus disorder prediction 348 382 - -
Psa6g2661 461 CDD STKc_CK1_delta_epsilon 8 282 - -
Psa6g2661 461 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2661 Psa-Chr6 206252181 206259861 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2661 8 213 MAP Kinase Kinase Kinase AT3G06030 25.926 2.66e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Psa6g2661 Pkinase 6.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2661 K08960 - jre:108991207 809.29