Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2639 ATGGCCATCAATTCCCAACCCTCATGTGAGTGCATAAGGCTCATATTCCTCAAGCTTTTTGCAGTTTCATTTTCTTCCTCAATCATCTTCTTGCTAGTCATCACCTTTGCCCCCTCTAATGTCAAGTTTCACGTAACTGAGGCTTCTCTCACAATGTTCAACCTCACAAGCAACAACATCCTGGATTACAAATTAGAAGCTAACATCACATCAAGAAATATCAACAAGAACATGGAAATGTACCACAAGAAGATCATCGCAATCGCATGGTACGAAGAGAATGACTTTGCTAGAGTAAATTTAGCATCTTTTGATCAAGGCCACAGGAATACTACTTTTCTCAATGTAGCGTCCGAAAGGAAGAGTGTGATGGAACTCGAACCTGAACAACTTTTCGAGTATAATGAAGAAGCACGTTTAGGGATCTATAAGGACTATGCTAGAGTGAATTTGTCATGTTTTGATCAAGGCCACAAGAATGCTACTTTTCTTTATTTAGTGTTTGGAGGGAGTAGTGTGATCAAACCCAAACCAAAACAACTTTTCGAGTATTATGAAGAGATGCGTTTAGGGATCTACAATGAGTCTTTCTTTTATTTGTAA 603 0.3864 MAINSQPSCECIRLIFLKLFAVSFSSSIIFLLVITFAPSNVKFHVTEASLTMFNLTSNNILDYKLEANITSRNINKNMEMYHKKIIAIAWYEENDFARVNLASFDQGHRNTTFLNVASERKSVMELEPEQLFEYNEEARLGIYKDYARVNLSCFDQGHKNATFLYLVFGGSSVIKPKPKQLFEYYEEMRLGIYNESFFYL* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2639 200 PANTHER HARPIN-INDUCED 1 143 193 - -
Psa6g2639 200 PANTHER HARPIN-INDUCED 1 23 147 - -
Psa6g2639 200 PANTHER OS05G0367900 PROTEIN 143 193 IPR044839 GO:0098542
Psa6g2639 200 PANTHER OS05G0367900 PROTEIN 23 147 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2639 Psa-Chr6 202861013 202861991 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2639 40 144 SNARE and Associated Proteins AT1G32270 28.571 4.04e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2639 - - gmx:100783747 142.51