Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2562 ATGGTGGAAGCTGTTTTCTATGCTGGAGGTCCGGTTTATAACATACCTAAAGGAAGAAAAGACGGAAGAAGATCGAAAATTGAGGATACTAGAAATTTGCCATCACCTACCTTCAATGCTTCTGAGCTCATTAGACAGTTTGGTCTACATGGTTTTTCGGCTCAAGAAATGGTCGCTCTTTCAGGGGCACATACATTAGGAGTGGCAAGATGTTCATCTTTCAAGAACAGATTAAGCCAAGTGGATCCAGCTTTGGATTCTGAATTTGCCAAGACACTATCTAGAACATGTACTTCCGGTGACAACGCGGAACAACCATTCGATGCAACGAGGAACGATTTCGACAATGTTTACTTTAACGCTTTGTTGAGGAGAAACGGCGTTCTGTTTTCAGATCAAGACCTCTATACTAGTCCAAGAACATGGAACTTTGTGAATGCTTATGCGATGAATGAAGCATTGTTCTTTCTTGATTTTCAACGTGCGATGGTGAAGATGGGTTTGCTTGATATTAAACAAGGTTCTAATGGTGAAGTTCGAGACAATTGCCGCAAAATTAACTAA 564 0.4078 MVEAVFYAGGPVYNIPKGRKDGRRSKIEDTRNLPSPTFNASELIRQFGLHGFSAQEMVALSGAHTLGVARCSSFKNRLSQVDPALDSEFAKTLSRTCTSGDNAEQPFDATRNDFDNVYFNALLRRNGVLFSDQDLYTSPRTWNFVNAYAMNEALFFLDFQRAMVKMGLLDIKQGSNGEVRDNCRKIN* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2562 187 PRINTS Haem peroxidase superfamily signature 9 21 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g2562 187 PRINTS Haem peroxidase superfamily signature 56 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g2562 187 PRINTS Haem peroxidase superfamily signature 107 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g2562 187 ProSiteProfiles Plant heme peroxidase family profile. 1 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g2562 187 PRINTS Plant peroxidase signature 9 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g2562 187 PRINTS Plant peroxidase signature 55 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g2562 187 PRINTS Plant peroxidase signature 105 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g2562 187 PRINTS Plant peroxidase signature 121 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g2562 187 PRINTS Plant peroxidase signature 161 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g2562 187 SUPERFAMILY Heme-dependent peroxidases 3 187 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa6g2562 187 Gene3D Peroxidase, domain 2 34 166 - -
Psa6g2562 187 Pfam Peroxidase 4 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa6g2562 187 PANTHER PEROXIDASE 47 3 185 - -
Psa6g2562 187 PANTHER PEROXIDASE 25-RELATED 3 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa6g2562 187 Gene3D - 3 187 - -
Psa6g2562 187 ProSitePatterns Peroxidases proximal heme-ligand signature. 56 66 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2562 Psa-Chr6 190967753 190970550 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2562 3 187 Peroxidase AT4G33420 71.351 7.91e-95 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2562 K00430 - gmx:100776019 318.546