Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2545 ATGATGAGTAGTGCAAGATCAAGAATAGGTCACTTTTACACCAAACCAATGCAAGAGCTTGAACAACAAACTCCTGTTTTCAAATACATGGTTACAGGAACACTATTCCACCAGATCTTATCTTCTCTATCAAAAGAAGCTTGGACAGTTCTATATCTTCAAGAATCTTTCCACATCCTCCAATTGGGTGGGGATGTTTTGGAAATGGGATTTGGCAGAAAAGTAGACCTAGAGCCCGGAAGGTGCAGAAGAACAAATGGCAAGAAATGGAGATGTTCAAAGGAAGCGTATCCAGACTCTAAGCAATGTGAAAGACACATACACAAAGGTAGAAACTGTTCAGGAAAGGCTATGGAACTAGTTGTGTCTTCATCATCAGCAGCAACAACAACACCTTAA 399 0.4035 MMSSARSRIGHFYTKPMQELEQQTPVFKYMVTGTLFHQILSSLSKEAWTVLYLQESFHILQLGGDVLEMGFGRKVDLEPGRCRRTNGKKWRCSKEAYPDSKQCERHIHKGRNCSGKAMELVVSSSSAATTTP* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2545 132 Pfam WRC 78 116 IPR014977 -
Psa6g2545 132 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
Psa6g2545 132 PANTHER GROWTH-REGULATING FACTOR-LIKE PROTEIN 5 131 - -
Psa6g2545 132 PANTHER - 5 131 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2545 Psa-Chr6 189555788 189556186 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2545 18 119 GRF Transcription Factor Family AT3G13960 50.467 4.77e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2545 - - vun:114166369 123.635