Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2524 ATGGCTGAAGTTGTTCAAGAACCCGATATTGTCGTTTCAGATCCATCACAGATCGAAGTTAAACTCTTTAACCGCTGGAGCTTCGATGATATCCAGCTCTCTGATGTGTCTTTGAGTGATTATATTGGAGTTGCGGCATCCAAACATGCCACATACGTTCCTCACACTGCTGGTAGGTACTCTGTGAAGAGGTTTAGGAAAGCTCAGTGCCCCATTGTGGAGAGGCTCACAAACTCTCTTATGATGCACGGTAGGAACAATGGAAAGAAGCTCAAGGCTGTTAAGATCATCAGGCATGCCATGGAAATTATTCATTTGCTTACTGACCAGAACCCAATTCAGGTCATTGTTGATGCCATCGTCAACAGTGGTCCCCGTGAAGATGCTACTCGCATTGGTTCTGCTGGAGTTGTGAGAAGACAGGCAGTGGATATCTCACCCCTTCGTCGTGTTAATCAAGCTATCTATCTTATCAGTACCGGTGCACGTGAAGCTGCTTTTAGGAATATTAAGACAATTGCTGAATGTTTGGCTGATGAACTTATTAATGCGGCAAAAGGTTCATCTAACAGTTATGCAATAAAGAAGAAAGATGAAATTGAGAGAGTTGCCAAGGCAAATCGTTAA 627 0.4338 MAEVVQEPDIVVSDPSQIEVKLFNRWSFDDIQLSDVSLSDYIGVAASKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLKAVKIIRHAMEIIHLLTDQNPIQVIVDAIVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLISTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2524 208 Pfam Ribosomal protein S7p/S5e 62 208 IPR023798 -
Psa6g2524 208 PANTHER RIBOSOMAL PROTEIN S7 8 208 IPR000235 GO:0006412
Psa6g2524 208 Gene3D Ribosomal protein S7 domain 6 208 IPR036823 -
Psa6g2524 208 SUPERFAMILY Ribosomal protein S7 21 208 IPR036823 -
Psa6g2524 208 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 2 208 IPR000235 GO:0006412
Psa6g2524 208 PANTHER 40S RIBOSOMAL PROTEIN S5 8 208 - -
Psa6g2524 208 CDD uS7_Eukaryote 21 208 IPR005716 GO:0003735|GO:0006412|GO:0015935
Psa6g2524 208 TIGRFAM uS7_euk_arch: ribosomal protein uS7 19 208 IPR005716 GO:0003735|GO:0006412|GO:0015935
Psa6g2524 208 ProSitePatterns Ribosomal protein S7 signature. 74 100 IPR020606 GO:0003723|GO:0003735|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2524 Psa-Chr6 187223064 187227903 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2524 19 208 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 90.000 9.61e-131 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2524 K02989 - gmx:100305898 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2524 6 187223064 187227903 Psa6g2524 6 187223064 187227903 ECH