Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2503 ATGAAGACTATTTTGAATTCCCTAGTTAATCCCGAATTTCCCTGTCCTGTTTCGGGTTGTTCCAAGAGGCAATTAGAGTTTATGATTATGTCGAAGGAAAGGGTTGGTGATAGAGGAGAGAGCTTGGAAAGAGGAAGATGTGCAAAAATCTGGTCTCGTTATACTTGGTTAGCTCGTAGAATCTGCACTATCAATTTCAGTGATCTAGCTCGCCAGAAGGATCAATTTCAGTGTGATAGATATGGCAAGGTGTATAGGAGGATACATAGGAAGAGAGAGCTTTATGCTGAGAAGGTTAACAACAGAGGACTTTGTGCCATTGCTCAGGCTGAGTCTCTTCGTTACAAACTCCTTGGTGGTCTTGCTGTCCGCAGGGCTTGCTATGGTGTTTTGAGATTCGTCATGGAGAGTGGTGCCAAGGGTTGCGAGGTCATTGTCAGTGGAAAGTTAAGAGCCCAAAGAGCCAAGTCCATGAAGTTCAAGGATGGTTACATGATTTCTTCTGGACAGCCAGTCAAGGACTACATTGACTCTGCAGTGAGACATGTGCTCCTTAGACAGGGTGTTCTCGGTATCAAGGTAAAGATCATGCTTGATTGGGATCCTAAAGGTAAGCAAGGTCCTAAAACTCCCCTCCCTGATATTGTCACCATTCACACTCCAAAGGAAGAGGAGGAGTATGTCCGACCTGCTGCTGTTGTGGCAAATGATATCGAGGTCCCTCTTCACATAATTTTTAAAGTTGGCATCAGAATGTTACGAATTCATTACTAG 774 0.4419 MKTILNSLVNPEFPCPVSGCSKRQLEFMIMSKERVGDRGESLERGRCAKIWSRYTWLARRICTINFSDLARQKDQFQCDRYGKVYRRIHRKRELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYVRPAAVVANDIEVPLHIIFKVGIRMLRIHY* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2503 257 Pfam Ribosomal protein S3, C-terminal domain 114 196 IPR001351 GO:0003735|GO:0006412
Psa6g2503 257 Gene3D - 101 227 IPR036419 -
Psa6g2503 257 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 91 240 - -
Psa6g2503 257 PANTHER 40S RIBOSOMAL PROTEIN S3-RELATED 91 240 - -
Psa6g2503 257 ProSitePatterns Ribosomal protein S3 signature. 155 191 IPR018280 -
Psa6g2503 257 SUPERFAMILY Ribosomal protein S3 C-terminal domain 101 199 IPR036419 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2503 Psa-Chr6 185395710 185399753 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2503 93 241 Cytoplasmic Ribosomal Protein Gene Family AT5G35530 85.906 1.90e-91 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2503 K02985 - gmx:100795581 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2503 6 185395710 185399753 Psa6g2503 6 185395710 185399753 ECH