Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2447 ATGGAGATGGCAAATTATGCATGTTATAATGTATCATTTAGTCCTTCAAATAATATCTGGATGGCTGATGATATTATGATAAAACGCGTTCCTCTTTTGTGTCTCCAAATTGCTTATGATATTTTGGTTTCTCGGCTTTTCTACTTCGTCCTCAAGTCCCTTCGCGTGCCCCTCATTATTGCGCAGGTTCAATATGGAATCCTAGCCGTTGAAACCTTTGCAAACTTAGGAATAATGTACTATGTGTTCCTAAGTGGATTAGAAATGAATTCAGACACCATCTTAAGATCAAGGAAGAAAGGTTTCCCTGTCCTTGCAAGAATCTTAGCTAATCTTAAACTTTTATATACAAAGCTTGGAAAAGATACATTGAGAGCAGCTATGTTAACCGACGCATATGGTTGGGTTATGTTCACCTTGTTGATTCCTTATTCGACTAGAGGTGGAAAGTCTTATCTCCCAGTAATCTCTACTTTGATGTTCATAGTTTTTTGCTTTGCTGTGGTGAGACCTATCCTTACTCCAATCATTGAACACATAACAAGTATGAACACGTGGCAAAAATCACACTTGTTGGACGTGTTGACGAGAGTGTTTATTTGTTCGTACATTACAAATTCTCTCGGTACATATCCTATTGTTGGAGCTTTTGTGTTTGGATTAATTTTGCCTCATGGAAAGTTTGCTGATATGGTTTTGGAATTGTCGGCCGATTTTGTTTCTGAGATTCTGTGTCCTGTTTACTTTGTTGGATTTGGTTTTAGACTCAAGTTGTCTTTCCTTTTTAAGCAAAAGAATGCAGGTTTAATGTTGTTGATTACACTTTTGTTATGCACACCTAAATTTTTGAGCTCTGTGATTGTCACTTTCTTCTTCGGTATGCCTGCCCGAGATGGAGTTGCCATTGGATTGCTTCTCAACACCAAGGGTATCGTGCTTGTCATACTACTGAATGTTGCTTGGGACAAAAGGAGTTTGGATCCATATACTTTTATGGTTATGATGCTTGCTATTATAGTAATGACTATAATGGTTTCTCCCTTGATCAATGCAATATACAACCCAAAATTCCGATTCATGCCATTGCAATTAAGGACCGTGCAAAAACTGATGTTCGATGTGGAGCTTCGAATCGTCGCTTGTGTCCACAATGCTAAACATGCCAATAACATGATCCATGTCATTGAAGCCACAAATGCTACGAGACTTTCACTTATACATGTCTCTGTAGCTCACTTAGTTCAACTCACTAAACATGGCACAACTATTCTTGTTTCCCAAATGGATAATTCAAACGGCACGGTTGGTGGCGCAGAAACAACCAACTATGGATCACAATTAGTGTTTGAGAGCATAACTAACACATTTGAAGAACTCGTAGAACAATACAATGCGGTTAGGTTTGACATATCAAGTGTTGTCTCGTCCTACACAACTATCCATGAGGACATTTACAACGTTGCCGAAGAGAAATGCGCCAGCCTAATTCTCCTCCCCTTTCACAAAGAGCACTTAATAATAGAAGATGCTCCGAAAATAATCCACAATGAACATTGTGAGATAAACAAAAATGTTCTACAACAAGCACCTTGTTCAGTAGGGATCTTTGTGGATCGAGGTTTAGGATCATTGTTAGAAACAAAACAGCGCATTATAATGATTTTCATCGGTGGACCTGACGACCGTGAAGCCTTGTCTATTGCATGGAGAATGGCGGGGCATCCAGGAACACAATTACATGTTGTGACGATCAATCTGTTAGGTAAGGACGCAGAAGAAACAAAATTGAAAATGGAAAAAAGTAAGCACAAGGCAGTGAGCAATAACGATTCAATTGTTTACTCAAAGAAGGAAGTCCATTTGAATACGGGCGAAGAGATTCCAACGCTTCTTAACGATATTGATAAACCTGGATATGATTTGTACATTGTTGGACAAGGAAGTGGTAAGAACTCGGTGATTTTTTCGAGTTTGTTGGAATGGTGTGATCATCCTGAACTTGGTGTTATAGGTGACATGTTGGCTTCAACTAGTTTTGGTACGCAATTTTCTGTGCTTATTGTCCAACAGTATTTGGTTGGGAGAAAAAGCGTTATTAGAAAATGTCATGAAGTGAAAAGTGGTACTGAAAATTTGTAA 2139 0.3862 MEMANYACYNVSFSPSNNIWMADDIMIKRVPLLCLQIAYDILVSRLFYFVLKSLRVPLIIAQVQYGILAVETFANLGIMYYVFLSGLEMNSDTILRSRKKGFPVLARILANLKLLYTKLGKDTLRAAMLTDAYGWVMFTLLIPYSTRGGKSYLPVISTLMFIVFCFAVVRPILTPIIEHITSMNTWQKSHLLDVLTRVFICSYITNSLGTYPIVGAFVFGLILPHGKFADMVLELSADFVSEILCPVYFVGFGFRLKLSFLFKQKNAGLMLLITLLLCTPKFLSSVIVTFFFGMPARDGVAIGLLLNTKGIVLVILLNVAWDKRSLDPYTFMVMMLAIIVMTIMVSPLINAIYNPKFRFMPLQLRTVQKLMFDVELRIVACVHNAKHANNMIHVIEATNATRLSLIHVSVAHLVQLTKHGTTILVSQMDNSNGTVGGAETTNYGSQLVFESITNTFEELVEQYNAVRFDISSVVSSYTTIHEDIYNVAEEKCASLILLPFHKEHLIIEDAPKIIHNEHCEINKNVLQQAPCSVGIFVDRGLGSLLETKQRIIMIFIGGPDDREALSIAWRMAGHPGTQLHVVTINLLGKDAEETKLKMEKSKHKAVSNNDSIVYSKKEVHLNTGEEIPTLLNDIDKPGYDLYIVGQGSGKNSVIFSSLLEWCDHPELGVIGDMLASTSFGTQFSVLIVQQYLVGRKSVIRKCHEVKSGTENL* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2447 712 PANTHER CATION/H + ANTIPORTER 5 100 - -
Psa6g2447 712 PANTHER CATION/H + ANTIPORTER 101 699 - -
Psa6g2447 712 PANTHER CATION/H(+) ANTIPORTER 21-RELATED 101 699 - -
Psa6g2447 712 PANTHER CATION/H(+) ANTIPORTER 21-RELATED 5 100 - -
Psa6g2447 712 Pfam Sodium/hydrogen exchanger family 103 349 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Psa6g2447 712 Gene3D - 103 358 IPR038770 -
Psa6g2447 712 Gene3D - 32 102 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2447 Psa-Chr6 178882364 178885091 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2447 4 692 Antiporter Super Family AT2G13620 32.319 5.00e-131 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2447 - - gmx:100792990 788.104