Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2414 ATGGAAAGAAGGGTTCTTGATGGTATCATTAATAGGTTGCTTGATGTTAGAGGAAGACCTGGCAAACAGGTTCAGCTTTCAGAGGGAGAAATTAAGCAACTTTGTATGGTTTCTAGAGATATCTTCTTGAAGCAGCCTAATCTGTTGGAACTTGAGGCACCAATTAAGATTTGTGGAGATATCCATGGTCAATATTCAGATCTATTAAGCCTATTTGAGCATGGTGGATTCCCTCCTCGTTCGAACTACTTGTTCTTAGGCGACTATGTAGACCGCGGAAAACAAAGCTTGGAAACAATATGTCTTCTTCTAGCTTACAAAATCAAATATCCTGAAAACTTCTTCCTTCTGAGAGGAAACCATGAATGCGCTTCGATAAATCGTGTCTATGGATTTTACGACGAATGTAAAAGGAGATTCAATGTAAGAGTATGGAAGATATTTTCAGACTGTTTCAACTGTTTGCCGGTCGCGGCTGTTGTTGACGACAAGATTATATGTATGCATGGTGGACTGTCACCTGAATTGCATAGTTTGAAACAGATAAGTAATTTGCCTAGGCCGAGTGAAGTTCCTGAAAGCGGTCTTTTATGCGATCTTCTGTGGTCTGATCCTAGTAAAGATGTTCAAGGTTGGGGAGTTAACGAACGCGGCGTTTCGTTTACTTTTGGTGCAAGTAAGGTTGCGGAGTTTCTTCGTAGGCATGATCTTGATTTGATTTGCAGAGCTCACCAGGTTGTTGAAGATGGATATGAGTTTTTTGCTAATAGACAACTTGTGACAGTTTTTTCTGCTCCTAATTACTGTGGAGAGTTTGACAATGCTGGAGCAATGATGAGTGTTGATGAAACACTTATGTGTTCTTTTCAGATATTAAAAGCTGTGGATCATAAAATGCCTAAGTTTGGTTTTAGGAGTGCCACTTCATTCAAGAAGGCATTTCTTGGGGCTAAAGTAAGAGCTGATTGA 969 0.3994 MERRVLDGIINRLLDVRGRPGKQVQLSEGEIKQLCMVSRDIFLKQPNLLELEAPIKICGDIHGQYSDLLSLFEHGGFPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRVYGFYDECKRRFNVRVWKIFSDCFNCLPVAAVVDDKIICMHGGLSPELHSLKQISNLPRPSEVPESGLLCDLLWSDPSKDVQGWGVNERGVSFTFGASKVAEFLRRHDLDLICRAHQVVEDGYEFFANRQLVTVFSAPNYCGEFDNAGAMMSVDETLMCSFQILKAVDHKMPKFGFRSATSFKKAFLGAKVRAD* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2414 322 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 318 - -
Psa6g2414 322 SMART pp2a_7 26 296 IPR006186 GO:0016787
Psa6g2414 322 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Psa6g2414 322 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Psa6g2414 322 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Psa6g2414 322 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Psa6g2414 322 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Psa6g2414 322 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Psa6g2414 322 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Psa6g2414 322 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Psa6g2414 322 SUPERFAMILY Metallo-dependent phosphatases 19 305 IPR029052 -
Psa6g2414 322 CDD MPP_PP1_PPKL 5 293 - -
Psa6g2414 322 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Psa6g2414 322 Gene3D - 11 321 IPR029052 -
Psa6g2414 322 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 318 - -
Psa6g2414 322 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2414 Psa-Chr6 176770371 176773284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2414 33 242 Calmodulin-binding Proteins AT5G63870 30.677 1.03e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2414 K06269 - gmx:100780047 580.096