Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2395 ATGGAAATTGTAGCTGCTGTTGTTGGAAAGATAACAGAGTATACTGTTGCTCCTATTGTACGTCAAGCAAGTTACTTGATATGCTACGAAGGCAATTTCAAAACGTTAGCTGATGATGTTAAAGACCTTGATGCTGCAAGAGAAAGAATGATGGTTTTGGTTGAAGAAGAAAGGAGAAATGGTAAAACAAATTTTCAAGGTGTGGACAACTGGATTGAGAATGTGAATGAGGTCATTGAGAAAGCAACTCAGCTGCAAAATGATCCTCGCCGTGCCAATGTTAGTTGCTCAGCATGGCCGTTTCACAATTTGATTTCGCGGCATCAACTAAGTAGGAAAGCGACAAAAATTGCAAAGGATGCTGTTCAAGTTCAAGGAAAAGGTGTTTTTGATCGACTTGGTTTCCGTTCTATTCTAGATGGAGTAGCATCCTCCTCCGGAACAAGAGGTGATGAAAAATATGAGACAAGGGAGTCACTTAAGCAGGAGATTATGAACGCGTTGGTAGACCTTAATTCAGGCAACATTGGAGTGTATGGGTTGGGTGGGGTGGGTAAAACAACTCTGTTGGTGGGAATTTCTCAAATGGCCAAGGAAAAAAAATTGTTTAATGAAGTGGTTACAACACATGTGTCCATAAATCCAGACTTGAAAACAATTCAAGGGGAGATAGCAGATCTGCTGGGTCTGCGATTCGATGAGGAGACTATTCTTGGCAGAGCTCATCGCCTAAGACAGAGAATCAAGATGGAGAAAAGTATCCTTGTCATTCTAGATGATATATGGACCAGAATTGATTTGAAGGAAGTGGGGATTCCGTTTGGTAATGAGCATAATGGTTGCAAATTGTTGATGACAAGTAGAGATCAGGATGTTTTGGTGCAAATGGATGTTTCAAAGGATTTCACTTTCAGACTTAATATTATGAGTGAAAAAGAGACATGGAGATTGTTTCAATTAACGGCTGGTGATGTGGTTAACAATAAGGATTTGAAAGATGTAGCAATTAAAGTTGCCCAAAAGTGTGAAGGTTTGCCTCTTAGAGTAGTTACGGTAGCGAGTGCAATGAAAAATAAGAGGGATGTCGAATCTTGGAGAGATGCATTAAGCAAATTACAAAGTAGTAATCATGCAGGGGTGAACGCGGCAACTTATTCTGCTTTGGAATTGAGTTACAACTCATTGGAAAGTAATGAAGTTAAGGCGCTATTCCTGCTTTATGCATTAATTCCAGATAATGGTGCAGAGTACTATCTGAAAGTGGCAATGGGGCTGGACATATTAAAGCATGTTAATACCATGGATGATGCAAGAAATCGACATTACACAATAATCAAATCTTTGGAGACTAGTTGTCTTTTGCTTGAAAGTAAAACAAGTGAAAAGGTTGAAATGCATGACTTTGTTCGTGATTTTGCTATCTCCATAGCACGGAGGGACAAACATGTATTTCTTAGTAAATTTGCTGATAATGAATGGCCAACCAATGATCTTTTAAACAGGTGCACGCAGATCATTTTATATAGGTGTCAACATATGCACAAGCTTCCTAAAATGATTGATTGTCCAAGCATTAAGTTTTTCATTTTGTACAGCAAGAATCGATCTTTAGAAATCCCGGATATGTTTTTTAAGGGTATGAAAAGCCTTACAGTGCTAGATTTAACAGCTCTGAACCTGCCTTCATTACCTACCTCGTTTCGGTTCTTAACAGACCTTAAATCGCTGTGTTTAGATTTTTGTGTTTTGGAAAATATGGATTCAATAAAAGCTTTGCAAAATTTAGAAATTCTTAGTCTCTGGAATTCTTCAATGATCAAGTTGCCTAGAGAAATAGGGAGATTGACTCAATTGAGAATGCTTGATTTGAGCAATTCAGGAATAGAAGTCGTCCCACCCAACATCATATCAAGCTTGACTAAATTGGAGGAGTTGTACATGGGCAGTACGTCTATTAACTGGGAAGTTGTGAATTCTACAGTTCAACATGAAAATGCTAGCATTGCTGAGCTTCGAAAACTACCCAACTTGACAGCTTTAGAGTTACAAATTCGGGAGACATGGATGTTGCCAAGGGACTTGCAAGTGATGTTTGAGAAGCTGAAAAGATACAAAATAGCTATCGGAGATGTATGGGAATGGTCTGACATTAAGGATGTAACCTTAAGAACATTGATGCTCAAACTTGGTACCAACATACATTTGGAGCATGGAATTAAAGCATTGATTAAAAGTGTTGAGAATTTGTACTTGGATGACATATATGGAATTCAAAATGTGGTTTATCAACTAGATGGGGAAGGATTTCCATTTCTGAAACATCTCCACGTCCAAAATAATGCAAACATGAAGCACATTGTTGACTCTAAAGAGAGAAATCAAATCCATGTGTCCTTTCCCATCTTGGAAACTCTGGTACTTGATAATCTTCACAACTTAGACCATATATGTCATGGTCCACTTTCACTTGCTTCTTTTAGATGTCTTAGTGTTATCAAAGTCAAAACCTGCTTCCAGTTAAAATATCTTTTCTCCTTTACAATGGTTAAAGGACTTTCTCACCTTTCTAAGATTGAAGTTTGTCATTGCAATTCTATGAAGGAGATAGTGCTCGAAGACAACAATCCCAGTGCAAATAATAACATGGCTAATGAAAAAATTGAGTTCAATGAATTGCGTTCTTTGACTTTAGAACATTTAGAGACACTTGATAATTTCTTCTCTAACTCTTTGACACACTCCAAGAGTAAGCAAAATCATCAAGGTTCGGAACCTTATGTTTCAACACCATTTTTCAATGCTCAGGCTGTGTTTTCTAATTTGGATACCCTTAAATTGAGCTCACTCAATTTGAGTAAAATTTGGGATGACAATCATAGTTCTATGTACAACTTGACTAGCTTGATTGTGGAGAATTGTGGCGGGTTGAAGTACTTATTCTCTTCTACTGTGGTTGAAAGTTTTAAGATCCTCACACACCTTGAAATAAGTAAATGTCCTTTGATGGAAGAGATAATATCTAAACAAGAGAGAAACAATGCATTGAATGAGGTTCCTTTTTTCAAATTAGAAAAACTGATATTGAAGGACATGGACAAGTTGAAGACAATATGGCACAGTCAGTTTAAGTCATTGAAGTCGTTGAAAGTGAACAATTGTGAGAAAATTGTGGTAGTTTTTCCTTCTTCAATGCAAAAAACTTATAATAAGTTAGAGATGCTGGAGGTTAAAAATTGTGCTTTGGTGGAAGTGATATTTGAATTGACATTCAGTTGTACAGAAGAGGATACAACAGATTTGGAACAAGTTACTATAAATGAACTGCCGAAGCTAAAAAAGATATGGAGTGAGGATCCTCAAGGAATTCTTAATTTTCAAAGTCTAAAATATGTACGACTGCATCAATGTGGAAGTTTAGAGTATCTCCTACGACTTTCTGTAGCCACTCATTGCTCACATCTCAAAGAACTTGTGATAGTAAATTGTGCAAGCATAAAAGAAATTGTTGCAGAGGAGAAAGAATCTAGGGTGTGTGCAGCTCCCATATTTGAGTTTAATCAATTGAATTCTCTAATCCTTCGGAACTCACACAGGCTCAAGGGGTTCTATGTTGGAAAACATACTCTATCATGTCCATCTTTGAGGAAAATCAATGTTTTCAATTGTTCTAAATTGAATTTGTATAGAACCCTTTCTACAATCAACTCTATAAGTAGTTTTCAATATGACAAACTCTTTGACATATCTCAACAGCCACCTTTCCTTGCCGAAGAGGTGATTCCAAATTTGGAGGAGTTGAGGATAGAACAAAAGGATGCTGGCATGATATTGCAAGCCCAAAATTCATGTGCTCTCTTTACCAAATTGACAAAGCTTTGTTTATCTATGTATAACAATGAAGAGGCTACATTTCCTTATTGGTTTCTTAATAATGTGCATACTATTGATTCGTTATGGGTTGAGTGGAGTTGCTTCAGGAAGATATTTCAAGATGAAGGACAAATAACTGAGACGACTCATACTCGGGTAAAAAATCTGAGATTGAATACATTACATAAACTTCAACATATATGTGAGGAAGGATCTCGAGTTAACCCAATTCTTGAGTTCCTTGAATGCTTACATGTTTTAAGTTGTTCTAGTATGATAAATTTGTTCCCTTCCTCTGTCACCCTTAAACATCTAGACCATATAGAGATAACATGTTGCAATGGGCTTAAAAATTTAATTACAATTGCTACGGCGCAAAGTTTGGTCAAACTCACATCACTTGAGGTAAAAGACTGTAAATCACTTGAAGAAATAATTACCGGAGTAGAAAATGTTGACATTGCATTTATTAGTTTACAAGTTTTGACGTTGGAGTGTTTGCCAAGCCTCAAAAGATTTTGCTCTAGTAAATGCTTCTTGAAGTTTCCGTTGTTGAAGAAAGTAGTTGTGAGAGAATGTCCTTACATGACGAAATTTTCAGAGGGAAACACAAGTACACCAAATCTTCGAAAAGTTAAAATTGCCGAAAATAAAAAAGAATCGTTTTGGAAGAGAAACCTTAACGATACAATACAAAAAATGTTTGAAGATAAGGTTGCATTTTCTAAATTCAAATATTTATCCTTATCTGATCACCCTGTGCTAAAGGATTTGTGGTATGGCCAAGTTGATCATCAAAATGTGTTTTGCAATCTGAAACATCTAGTGGTGCAAAGATGTGATTTCTTATCACATGTACTTTTTCCATCAAATATTGTTCAAGTTCTACATGGATTGGAAAAACTAGAAGTAAAAGAATGTGATTCATTAAAAGCCATATTTGATGTGAAAGGTATGAAATCTAATGAGTTAATATTGTGTAAACAAAACAGTCAATTGAAAACATTGACCTTGTCTTGTTTACCAAACTTGGAGCACATATGGAACGAGGATCCTCATGAAACTATTAACTTTGGAAACCTATGCTCGATGGATGTTTCTTCGTGCCAAAGCTTGTCATACATATTTTCATTGTCGCTATGCCAAGATCTTGGAAATCTTGAAATGCTTAAGATAGATTCTTGCGGAGTCAAGGATATTGTTGCAATGAAAGAAGGATCAATGGAAATCAGTTTTAATTTTCCCCAACTAAATACATTGGCACTTCATTGTTTACCAAATCTAAAGAGTTTCTATCAAGGAAAACATACTTTAGAGTGCTCATCATTGAAGACTTGGAAAACTTGGAATTCATTTCTTTGTTAA 5235 0.3618 MEIVAAVVGKITEYTVAPIVRQASYLICYEGNFKTLADDVKDLDAARERMMVLVEEERRNGKTNFQGVDNWIENVNEVIEKATQLQNDPRRANVSCSAWPFHNLISRHQLSRKATKIAKDAVQVQGKGVFDRLGFRSILDGVASSSGTRGDEKYETRESLKQEIMNALVDLNSGNIGVYGLGGVGKTTLLVGISQMAKEKKLFNEVVTTHVSINPDLKTIQGEIADLLGLRFDEETILGRAHRLRQRIKMEKSILVILDDIWTRIDLKEVGIPFGNEHNGCKLLMTSRDQDVLVQMDVSKDFTFRLNIMSEKETWRLFQLTAGDVVNNKDLKDVAIKVAQKCEGLPLRVVTVASAMKNKRDVESWRDALSKLQSSNHAGVNAATYSALELSYNSLESNEVKALFLLYALIPDNGAEYYLKVAMGLDILKHVNTMDDARNRHYTIIKSLETSCLLLESKTSEKVEMHDFVRDFAISIARRDKHVFLSKFADNEWPTNDLLNRCTQIILYRCQHMHKLPKMIDCPSIKFFILYSKNRSLEIPDMFFKGMKSLTVLDLTALNLPSLPTSFRFLTDLKSLCLDFCVLENMDSIKALQNLEILSLWNSSMIKLPREIGRLTQLRMLDLSNSGIEVVPPNIISSLTKLEELYMGSTSINWEVVNSTVQHENASIAELRKLPNLTALELQIRETWMLPRDLQVMFEKLKRYKIAIGDVWEWSDIKDVTLRTLMLKLGTNIHLEHGIKALIKSVENLYLDDIYGIQNVVYQLDGEGFPFLKHLHVQNNANMKHIVDSKERNQIHVSFPILETLVLDNLHNLDHICHGPLSLASFRCLSVIKVKTCFQLKYLFSFTMVKGLSHLSKIEVCHCNSMKEIVLEDNNPSANNNMANEKIEFNELRSLTLEHLETLDNFFSNSLTHSKSKQNHQGSEPYVSTPFFNAQAVFSNLDTLKLSSLNLSKIWDDNHSSMYNLTSLIVENCGGLKYLFSSTVVESFKILTHLEISKCPLMEEIISKQERNNALNEVPFFKLEKLILKDMDKLKTIWHSQFKSLKSLKVNNCEKIVVVFPSSMQKTYNKLEMLEVKNCALVEVIFELTFSCTEEDTTDLEQVTINELPKLKKIWSEDPQGILNFQSLKYVRLHQCGSLEYLLRLSVATHCSHLKELVIVNCASIKEIVAEEKESRVCAAPIFEFNQLNSLILRNSHRLKGFYVGKHTLSCPSLRKINVFNCSKLNLYRTLSTINSISSFQYDKLFDISQQPPFLAEEVIPNLEELRIEQKDAGMILQAQNSCALFTKLTKLCLSMYNNEEATFPYWFLNNVHTIDSLWVEWSCFRKIFQDEGQITETTHTRVKNLRLNTLHKLQHICEEGSRVNPILEFLECLHVLSCSSMINLFPSSVTLKHLDHIEITCCNGLKNLITIATAQSLVKLTSLEVKDCKSLEEIITGVENVDIAFISLQVLTLECLPSLKRFCSSKCFLKFPLLKKVVVRECPYMTKFSEGNTSTPNLRKVKIAENKKESFWKRNLNDTIQKMFEDKVAFSKFKYLSLSDHPVLKDLWYGQVDHQNVFCNLKHLVVQRCDFLSHVLFPSNIVQVLHGLEKLEVKECDSLKAIFDVKGMKSNELILCKQNSQLKTLTLSCLPNLEHIWNEDPHETINFGNLCSMDVSSCQSLSYIFSLSLCQDLGNLEMLKIDSCGVKDIVAMKEGSMEISFNFPQLNTLALHCLPNLKSFYQGKHTLECSSLKTWKTWNSFLC* 1745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2395 1744 PANTHER - 1125 1225 - -
Psa6g2395 1744 PANTHER - 20 1106 - -
Psa6g2395 1744 PANTHER - 1559 1634 - -
Psa6g2395 1744 PANTHER - 1367 1521 - -
Psa6g2395 1744 PANTHER - 1646 1733 - -
Psa6g2395 1744 Pfam NB-ARC domain 158 392 IPR002182 GO:0043531
Psa6g2395 1744 Gene3D - 142 302 IPR027417 -
Psa6g2395 1744 SUPERFAMILY L domain-like 465 864 - -
Psa6g2395 1744 Gene3D - 308 396 IPR042197 -
Psa6g2395 1744 Gene3D Ribonuclease Inhibitor 849 1064 IPR032675 -
Psa6g2395 1744 Gene3D Ribonuclease Inhibitor 1065 1239 IPR032675 -
Psa6g2395 1744 Coils Coil 68 88 - -
Psa6g2395 1744 Gene3D Ribonuclease Inhibitor 1516 1741 IPR032675 -
Psa6g2395 1744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 405 IPR027417 -
Psa6g2395 1744 PANTHER RPP4C3 1559 1634 - -
Psa6g2395 1744 PANTHER RPP4C3 20 1106 - -
Psa6g2395 1744 PANTHER RPP4C3 1367 1521 - -
Psa6g2395 1744 PANTHER RPP4C3 1125 1225 - -
Psa6g2395 1744 PANTHER RPP4C3 1646 1733 - -
Psa6g2395 1744 SUPERFAMILY RNI-like 1367 1624 - -
Psa6g2395 1744 PRINTS Disease resistance protein signature 175 190 - -
Psa6g2395 1744 PRINTS Disease resistance protein signature 248 262 - -
Psa6g2395 1744 PRINTS Disease resistance protein signature 342 356 - -
Psa6g2395 1744 PRINTS Disease resistance protein signature 613 629 - -
Psa6g2395 1744 SUPERFAMILY RNI-like 1107 1320 - -
Psa6g2395 1744 Pfam Leucine rich repeat 594 651 IPR001611 GO:0005515
Psa6g2395 1744 Gene3D Ribonuclease Inhibitor 425 796 IPR032675 -
Psa6g2395 1744 Gene3D Ribonuclease Inhibitor 1240 1515 IPR032675 -
Psa6g2395 1744 SUPERFAMILY L domain-like 936 1088 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2395 Psa-Chr6 174053839 174061397 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2395 176 635 WRKY Transcription Factor Family AT5G45050 22.243 1.26e-09 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2395 - - mtr:MTR_2g089975 2280.75