Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2364 ATGAAAACTTTCAAACTCCACCACCACCACCACCACCACCACCACCAATTCTCCACCCTCTTCTTCTTCCTCCTCCTCCCTTTCCTTAACTCCCAAACTCCAACACAAGTAAACAACACAGGCTACACCTGCAACAACAACAACAACAACAAAAACCAAACAAACAACTATCCATGTCAATCCTACGCATTCTACAGAGCAACCTCACCAAACTACCTCGACCTAGCCACAATCTCCGACCTCTTCTCACTCCCTCGCTTAACCATCGCAAAACTGTCCAACATCTCTTCACCTTCCACTCCTCTAATCCCCAACCAACCCCTCCTCATTCCCATAGCCTGTTCCTGCAACTTCATCAACACCACTTTCGGTTCCATCTCTTACTCCAACATCACCTACACCATCAAACCGAAAGACACTTTTTTCCTTGTTTCAACTATAAACTTCCAGAATCTCACTACTTACCCTTCCGTTGAAGTCGTTAACCCCAATCTCGTTGCTACTAATCTCTCTATTGGTGATAATGCTGTTTTCCCTATCTTTTGTAAGTGTCCGGATAAAACCAGAAACAGTTCCAGTTTCATGATTTCTTATGTTGTTCAGCCTTTTGATAATGTTTCATCTATTGCTTTGATGTTTGGAGCTAGTGAAAAGTCTATAGTTGATGTTAATGGTCAGAAATTACATGATTATGATACTATTTTTGTTCCTGTTACTAAATTACCCGTTTTGAAACAACCTAGTACTGTTGATGTTCCTTCTCCGGCACCGAGTGGGAATTCTAATGATGGTGGTGATGATAAGAGTGGAATTGTTAGAGGGTTGGGTATTGGATTGGGGATTTTAGGGTTTTTGTTGATTTTGATTTTGGGGATTTGGTTGTACAGAGAGATTCTGTTTAAGAAGGAAGAGAAAGGGAAAGATTTGTATTTTGGGGAGAAAGGGAAAAAAGGGGATGATCATAAGAAGAAGGGGATGGATGTGAATTTTATGGCTAATGTTTCTGATTGTTTGGATAAGTATAGAGTTTTTGGACATGATGAATTGGTTGAAGCTACGGATGGGTTTGATGAAAGTTTTTTGATTCAAGGGTGTGTTTATAGAGGTGAAATTGATGGACAAGTTTATGCTATTAAGAAGATGAAGTGGAATGCTTATGAAGAGCTCAAAATTTTGCAGAAGGTAAACCATGGGAATTTGGTGAAGTTGGAAGGGTTTTGCATAGAACCAGAAGAATCAAATTGCTATTTAGTCTATGAATATGTTGAAAATGGATCTCTATACTCATGGTTACATGAAGACAAAAATGAAAAGTTGAATTGGGTAAGAAGACTAAGAATAGCCATTGACATAGCCAATGGTTTATTATACATTCATGAACACACAAGACCTAAAGTTGTACACAAAGACATTAAAAGTAGCAACATTCTCTTGGACTCAAACATGAGAGCTAAAATTGCGAATTTCGGTCTTGCGAAGAGCGGAATAAATGCAATTACAATGCACATTGTAGGAACACAAGGCTACATTTCACCCGAATACCTAACCGACGGTGTCGTGTCGACAAAGATGGATGTGTTTTCCTTTGGTGTTGTGTTGTTGGAGTTGATTTCGGGGAAGGAAGTGATTGATGAGGAGGGAAATGTTTTGTGGGCTAGTGCTATAAAAACATTTGAAGTGAAAAATGAACAAGAAAAAGCTAGGAGACTTAAGGAATGGTTGGATAAAGCCATTTTAAAGGAGACATGTTCAATGGAAAGTTTGATGGGTGTACTTAATGTTGCTATTGCTTGTTTGCATAGAGATCCAACAAAGAGACCTAGTATTATAGATATTGTTTATTCACTTACTAAATGTGAAGAGAATGGATTTGAGCTATCTGATGATGGGTTTGGTTCACAAAGTTTAGTGGCTAGGTGA 1920 0.3875 MKTFKLHHHHHHHHHQFSTLFFFLLLPFLNSQTPTQVNNTGYTCNNNNNNKNQTNNYPCQSYAFYRATSPNYLDLATISDLFSLPRLTIAKLSNISSPSTPLIPNQPLLIPIACSCNFINTTFGSISYSNITYTIKPKDTFFLVSTINFQNLTTYPSVEVVNPNLVATNLSIGDNAVFPIFCKCPDKTRNSSSFMISYVVQPFDNVSSIALMFGASEKSIVDVNGQKLHDYDTIFVPVTKLPVLKQPSTVDVPSPAPSGNSNDGGDDKSGIVRGLGIGLGILGFLLILILGIWLYREILFKKEEKGKDLYFGEKGKKGDDHKKKGMDVNFMANVSDCLDKYRVFGHDELVEATDGFDESFLIQGCVYRGEIDGQVYAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIEPEESNCYLVYEYVENGSLYSWLHEDKNEKLNWVRRLRIAIDIANGLLYIHEHTRPKVVHKDIKSSNILLDSNMRAKIANFGLAKSGINAITMHIVGTQGYISPEYLTDGVVSTKMDVFSFGVVLLELISGKEVIDEEGNVLWASAIKTFEVKNEQEKARRLKEWLDKAILKETCSMESLMGVLNVAIACLHRDPTKRPSIIDIVYSLTKCEENGFELSDDGFGSQSLVAR* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2364 639 SUPERFAMILY Protein kinase-like (PK-like) 348 616 IPR011009 -
Psa6g2364 639 ProSiteProfiles LysM domain profile. 196 243 IPR018392 -
Psa6g2364 639 ProSiteProfiles Protein kinase domain profile. 338 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2364 639 Gene3D Phosphorylase Kinase; domain 1 326 421 - -
Psa6g2364 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Psa6g2364 639 PANTHER - 33 631 - -
Psa6g2364 639 Pfam LysM domain 198 236 IPR018392 -
Psa6g2364 639 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 33 631 - -
Psa6g2364 639 SMART serkin_6 360 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2364 639 Pfam Protein kinase domain 377 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2364 639 Gene3D Transferase(Phosphotransferase) domain 1 422 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2364 Psa-Chr6 170252168 170255479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2364 41 618 Receptor kinase-like Gene Family AT2G23770 33.609 3.35e-80 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Psa6g2364 Pkinase 6.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2364 - - lang:109352405 839.721