Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2355 ATGGCACAATCTTTGTTATTCACAGTGAAGAGATGTGCCCCTGAATTTGTCACTCCATCGAAACCCACACCTCATGAAATAAAATTACTCTCAGACATTGATGACAATCATTCGTTACGTTTTCATATTCCTGGTATACAATTTTACAAGTACGATCCTATAATGAAAGGAAAAGACCCTGTTGATGTAATTAGAAAAGCACTAGCAAAAACGCTGGTGTATTATTATCCATTTGCAGGTAGATTGAGAGAGGGTGATGGTAGGAAACTTATGGTTGATTGTACTGGAGAAGGTGTTTTGTTCATAGAAGCCGATGCTGATGTTACTCTAAAAGATTTCGGTGATAATCTTCTTCCTCCATTTCCATTTTTGGATGAAGTTCTTTACGATGTTCCTGGTTCTTCAAACGTGCTTAACGCTCCATTGATGCTTATTCAGGTAACACGCCTCAAGTGTGGTGGTTTCATATTTGCTATTCGTATAAACCATACAATGAGTGATGCAACAGGTATAGTTCAATTCATGAATGCCTTAGCAGAAATATGTCGTGGAATGAATGAACCTTCAATCTCACCGGTGTGGTGCAGAGAACTTCTAAGCGCAAGGAACCCACCAAGAGTTACATGTATTCATCCTGAACTCGAACAAGCACCTGATAACAAGGAAGCCATCATATCTTTAGACAACTTGGTTAAACGCACATTTTTCTTTGGTTCGGTCGAGGTAGCCAAAATTCACTCTCTCCTTCCAACCAACATGGTACACCAGTACACCAAATATGAAATCATCACCGCATTTGTTTGGCGATGTCGCACAATAGCCTTACAACCAGATTCAGACGAAGAAGTTCGTATGATGACCGTAGTCAATGCACGTAGGACATCGTTTAATCTACAACTACCAAATGGTTACTACGGTAATGTTGTTGTGAATCCTGTAGCAGTGACATCCGCAAGAAAATTAATTGAAAATCCATTGGAGTATGCATTGAATTTAATAAAGAAATCAAATGCTAATGTCACCAAAGAGTATATCCATTCATTGGTGGATTTAATGGTTATCAAGGGTCGACATAGTTTTTCCACGAGGGGATTGTTTATAGTGTCCAACGTTACACATGTTGGACTTAATGATGTGGATTATGGTTGGGGGAAAGCTGTTTATGGTGGACCAGCTAACGATAGTTCTGTTCCTGGCATTGCTACCTATTACTTACCTTTTCAAAATGAGAAGGGAGAGAAAGGTATGGTTATACCGCTTCGTTTGCCAGCTCAAGCCATGGAGAGGTTCGTTAAGGAGCTTGATAGTGTGCTTAAGGGAAACAATAACCATCCTACTAAGGATGATCCAACATCTTCAATCATCGAATCATTGTTGTAG 1380 0.3957 MAQSLLFTVKRCAPEFVTPSKPTPHEIKLLSDIDDNHSLRFHIPGIQFYKYDPIMKGKDPVDVIRKALAKTLVYYYPFAGRLREGDGRKLMVDCTGEGVLFIEADADVTLKDFGDNLLPPFPFLDEVLYDVPGSSNVLNAPLMLIQVTRLKCGGFIFAIRINHTMSDATGIVQFMNALAEICRGMNEPSISPVWCRELLSARNPPRVTCIHPELEQAPDNKEAIISLDNLVKRTFFFGSVEVAKIHSLLPTNMVHQYTKYEIITAFVWRCRTIALQPDSDEEVRMMTVVNARRTSFNLQLPNGYYGNVVVNPVAVTSARKLIENPLEYALNLIKKSNANVTKEYIHSLVDLMVIKGRHSFSTRGLFIVSNVTHVGLNDVDYGWGKAVYGGPANDSSVPGIATYYLPFQNEKGEKGMVIPLRLPAQAMERFVKELDSVLKGNNNHPTKDDPTSSIIESLL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2355 459 Pfam Transferase family 13 434 - -
Psa6g2355 459 PANTHER ALCOHOL ACYLTRANSFERASE 7 440 - -
Psa6g2355 459 Gene3D - 8 214 IPR023213 -
Psa6g2355 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 440 - -
Psa6g2355 459 Gene3D - 215 434 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2355 Psa-Chr6 169559049 169560490 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2355 40 434 Monolignol Biosynthesis Gene Families AT5G48930 30.676 1.20e-51 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2355 K19861 - gmx:100797017 573.548