Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2354 ATGAAAGGAAAGACCCTGTTGAGTGCAATTAGAAAAGCACTGGCGAAAACGCTTGTGTTTTATTATCCATTTGCAGATTTCGGCGATAATCCTCTTCCTCCATTTCCATTTTTGGATGAAGTTCTTTATGATGTTCCTGGTTCTTCAAACGTGCTTAACGCTCCATTGATGCTTATTCAGGTAACACGCCTCAAGTGCGGTGGTTTCATATTTGCTATTCGTATAAACCATACAATAAGTGATGCATTTGGTATAGCTCAATTCATGAATGCCTTAGCAGAAATATGTCGTGGAATGAATGAACCTTCAATCTCACCAGTGTGGCGAAGAGAACTTCTAAGCGCAAGGAACCCACCAAGAGTGACATGTTATCATCCTGAACTCGAACAAGCACCTAATAACAAAGGAATCATCAATGTCATATCCATAGACAACATGGCCCGACGAACTTTCTTCTATGGTCCCAACGAGTTAGCCACAATCCGCTCCCTCCTTCCAACCAACCAACAACAACAATACTCCAAATTTGAAATCATCACTGCATTCCTTTGGCGTTGTCGTACAATAGCGTTACAACTAGATTCAAACAAAGAAGTCTGTATGTATTTCGGAGTCAATGGACGTAGTAAATTTGTTGACCTACAATTGCCGAACGGCTACTATGGTAATGTTGTTGCAATTCCTGCTGCTATAACAACAGCAGGCAAAATTGTTGAAAGTACGTCGGGGTATATGTATGCATTGAATTTAGTTCAGAATGCAAAAACTAAAGTGACCAAAGAATATATGCGTTCATTGGCAGATTTAATTGTTATCAAGGGTCGACCTCTGTTTACTACGACAAAACTTATGTTTATAGTGTCTGATACTACACGTGTGGGATTTAGAGATGTCAATTTTGGTTGGGGAAAAGCTGTTTATGGAGGACCAGCTATCGATTCTCCACTTCCTGGTATTCTTAGCTTTTATATACCTTTTACAAATGTCAAAGGAGAGGAAGGTTTCGTTGTACCATTTTGTTTGCCAGCACAAGCAATGGAGAGATTTGTAATCGAACATGATAGTGTGCTCAAGGGAAACAGTAACCAATTTGCAAACGGTGATACAAATTAA 1113 0.3953 MKGKTLLSAIRKALAKTLVFYYPFADFGDNPLPPFPFLDEVLYDVPGSSNVLNAPLMLIQVTRLKCGGFIFAIRINHTISDAFGIAQFMNALAEICRGMNEPSISPVWRRELLSARNPPRVTCYHPELEQAPNNKGIINVISIDNMARRTFFYGPNELATIRSLLPTNQQQQYSKFEIITAFLWRCRTIALQLDSNKEVCMYFGVNGRSKFVDLQLPNGYYGNVVAIPAAITTAGKIVESTSGYMYALNLVQNAKTKVTKEYMRSLADLIVIKGRPLFTTTKLMFIVSDTTRVGFRDVNFGWGKAVYGGPAIDSPLPGILSFYIPFTNVKGEEGFVVPFCLPAQAMERFVIEHDSVLKGNSNQFANGDTN* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2354 370 PANTHER ALCOHOL ACYLTRANSFERASE 25 358 - -
Psa6g2354 370 Pfam Transferase family 26 351 - -
Psa6g2354 370 Gene3D - 141 351 IPR023213 -
Psa6g2354 370 Gene3D - 24 130 IPR023213 -
Psa6g2354 370 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 358 - -
Psa6g2354 370 Coils Coil 369 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2354 Psa-Chr6 169545218 169546429 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2354 10 352 Monolignol Biosynthesis Gene Families AT5G48930 25.707 3.31e-33 126