Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2353 ATGAAAGGAAAAGACCCTGTTGATGCAATTAGAAAAGCACTGGCGAAAACGCTTGTGTTTTATTATCCATTTGCAGGTAGATTGAGAGAAGGTGCTGGTAGGAAACTTATGGTTGATTGTACCGGAGAAGGTGTTTTGTTCATAGACGCCGATGCTGATGATGTTACTCTTAAAGATTTCGGCGATAATCCTCTTCCTCCATTTCCATTTTTGGATGAAGTTCTTTATGATGTTCCTGGTTCTTCAAACGTGCTTAACGCTCCATTGATGCTTATTCAAGTAACACGCCTCAAGTGTGGTGGTTTCATATTTGCCATTCGTATAAACCATACAATGAGTGATGCAATTGGTATAGCACAATTCATGAATGCCTTAGCAGAAATATGTCGTGGAATGAATGAACCTTCAATCTCACCGGTGTGGTGCAGAGAACTTCTAAGCGCAAGGAACCCACCAAGAGTGACATGTTATCATCCCGAACTCGAACAAGCACCTCAATACAAAGGAACTGTCGTATCCTTAAACAACATGGTCCGAAGAACATTCTTCTATGGTCCCAACGAGGTAGCCACAATCCGCTCCCTCCTTCCAGCAAACCAACAACAACAATACTCCAAACTAGAAATCATCACCGCGTTCCTTTGGCGTTGTCGTACAATAGCGTTACAATTTGATTCAAACGAAGAAGTTCATATGAATATGGTAGTGAATGGACGTAGCAAATTTGTAAACCTACATATACCCAATGGTTACTATGGTAATGTTGTTGCAATTCCTGCTGCTATAACAACAGCAGGCAAAATTGTTGAAAATAAGTCGGGGTATATGTATGCATTGAATTTAGTTCAGAATGCAAAAACTAAAGTGACCAAAGAATATATGCATTCATTGGCAGATTTAATTGTTATCAAGAGTCGACCTCTGTCTACTATGACGGAACTTATGTTTATAGTGTCTGATACTACACGTTTGGGATTTAGAGATGTTGATTTTGGTTGGGGAAAAGCTGTTTATGGTGGACCAGCTATCGATTCTCCACTTCCTGGTATTCTTAGCTTTTATATTCCTTTTACAAATGTTAAAGGAGAGGAAGGTTTGGTTGTACCATTTTGTTTGCCAGCACAAGCCATGGAGAGATTTGTAATAGAACATGATAGTGTGTTTAAGGGAAACAGTAACCAATCTGCAAACGGTGATACAAATTAA 1206 0.3939 MKGKDPVDAIRKALAKTLVFYYPFAGRLREGAGRKLMVDCTGEGVLFIDADADDVTLKDFGDNPLPPFPFLDEVLYDVPGSSNVLNAPLMLIQVTRLKCGGFIFAIRINHTMSDAIGIAQFMNALAEICRGMNEPSISPVWCRELLSARNPPRVTCYHPELEQAPQYKGTVVSLNNMVRRTFFYGPNEVATIRSLLPANQQQQYSKLEIITAFLWRCRTIALQFDSNEEVHMNMVVNGRSKFVNLHIPNGYYGNVVAIPAAITTAGKIVENKSGYMYALNLVQNAKTKVTKEYMHSLADLIVIKSRPLSTMTELMFIVSDTTRLGFRDVDFGWGKAVYGGPAIDSPLPGILSFYIPFTNVKGEEGLVVPFCLPAQAMERFVIEHDSVFKGNSNQSANGDTN* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2353 401 Gene3D - 163 382 IPR023213 -
Psa6g2353 401 Gene3D - 2 162 IPR023213 -
Psa6g2353 401 PANTHER ALCOHOL ACYLTRANSFERASE 5 389 - -
Psa6g2353 401 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 389 - -
Psa6g2353 401 Pfam Transferase family 7 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2353 Psa-Chr6 169532206 169534557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2353 10 383 Monolignol Biosynthesis Gene Families AT5G48930 28.680 4.72e-44 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2353 K19861 - gmx:100797017 502.286