Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2352 ATGGCCCAATCTTTGCTATTCACGATGAAGAGGCGTGCAGTTCCATCAAATATACACCATCTCCACTTTCAATACTTGCATATACCATACTATCTAAAACCATTTTCAAGTATGGCACAATCTTTGTTATTCACAGTGAAGAGATGTGCCCCTGAATTGGTCACTCCATCGAATAAACGCCATTTCCACTATCAGTACTTACATAAACAATACCATCAAAAACCATTATCAAGTATTGCCCAATCTGTGCTATTCACATTGAAGAAGCCTGCCGCTGGATTGGTCACTCCATCCAATATACACCATCAAAAGTCATTTTCAATTCTGGCCCAATGTCTCATATTCCCAGTCAAGAAGCGTGCTCCTGAATTAGTTACTCCATCGAAACCAACACCTCGTGAAGTAAAATTACTATCCGACATCGATGACCAAGATCTGTTACGTGTACAAGTTCCCCTGATACAGTTCTATAACTATGATCCAAATATGAAAGGAAAAGACCCTGTTGATGTTATTCGAAAAGCACTTGCGAAAACGCTCGTGTTTTATTATCCATTTGCAGGTAGGTTGAGAGAAGGAGCTGGTAGGAAACTTATGGTTGATTGTACTGGAGAAGGTGTTTTGTTCATTGAAGCTGATGCCGATGTTAGTCTTAAAGATTTCGGTGATAATCTTCTTCCTCCATTTCCGTTTCTGGATCAAGTTCTTTATGATGTTCCTGGTTCTTCAAACATGCTTAACGCTCCATTGATGCTTATTCAGGTAACACGCCTCAAGTGTGGTGGTTTCATATTTGCTATTCGTGTGAACCATACAATGAGTGATGCAACAGGTATAGTTCAATTCATGAATGCCTTAGCAGAAATATGTCGTGGAATGAATGAACCTTCAATCTCACCGGTGTGGCGCAGAGAACTTCTAAGCGCAAGGAACCCACCGAGAGTGACATGTGATCACCCCGAACTCGAACAAGCACCTGATAAGAAAGGAACCGTCAATGGGATATCCTTAGACAACATGGTCCCACGAACATTCTTCTTTGGTCCCAACGAGGTAGCCACAATTCGGTCTCTCCTTCCAACCAACCAACAACAACAGTACACCAAATTTGAAATCATCACCGCTTTTCTTTGGCGTTATCGTACAATAGCGTTACAACTAGATTCAAACGAAGAAGTTAGTATGTATTTCGCAGTCAATGGACGTAGCAAATATGTAAACCTACAATTACCAAATGGTTACTATGGTAATGTTGTTGGAAATCCTGCTATTGTTACAACAGCAGGCAAAATTGTTGAAAATACGTTGGGGTATATGTATGCATTGAATTTAGTTAAGAATGCAAAAGCTAAGGTCACCAAAGAGTATATGCATTCATTGGCAGATTTAATTGTTATCAAGGGTCGACCTCTGTTTACTCAAAGGAAATTTATGTTTATTGTGTCTGATACTACACGATTGGGATTTAGAGATGTCGATTTTGGTTGGGGAAAAGCTATTTATGGAGGACCGGCTATCGAATCTCCTTTTCCTGGTATTTTTAGCTTGTATATACCTTTTACAAATGCTAAAGGAGAGGAAGGTTTGGTTATAACACTTTGTTTGCCAAAACAAGCCATGGAGAGGATGGTGAAAGAACTTGATAGTGTGCTTAAGGTAAAAAGTAACCAATCTACAAACGGTGATGCAAATTAA 1695 0.3959 MAQSLLFTMKRRAVPSNIHHLHFQYLHIPYYLKPFSSMAQSLLFTVKRCAPELVTPSNKRHFHYQYLHKQYHQKPLSSIAQSVLFTLKKPAAGLVTPSNIHHQKSFSILAQCLIFPVKKRAPELVTPSKPTPREVKLLSDIDDQDLLRVQVPLIQFYNYDPNMKGKDPVDVIRKALAKTLVFYYPFAGRLREGAGRKLMVDCTGEGVLFIEADADVSLKDFGDNLLPPFPFLDQVLYDVPGSSNMLNAPLMLIQVTRLKCGGFIFAIRVNHTMSDATGIVQFMNALAEICRGMNEPSISPVWRRELLSARNPPRVTCDHPELEQAPDKKGTVNGISLDNMVPRTFFFGPNEVATIRSLLPTNQQQQYTKFEIITAFLWRYRTIALQLDSNEEVSMYFAVNGRSKYVNLQLPNGYYGNVVGNPAIVTTAGKIVENTLGYMYALNLVKNAKAKVTKEYMHSLADLIVIKGRPLFTQRKFMFIVSDTTRLGFRDVDFGWGKAIYGGPAIESPFPGIFSLYIPFTNAKGEEGLVITLCLPKQAMERMVKELDSVLKVKSNQSTNGDAN* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2352 564 Pfam Transferase family 116 547 - -
Psa6g2352 564 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 117 553 - -
Psa6g2352 564 Gene3D - 324 546 IPR023213 -
Psa6g2352 564 Gene3D - 116 323 IPR023213 -
Psa6g2352 564 PANTHER ALCOHOL ACYLTRANSFERASE 117 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2352 Psa-Chr6 169516993 169518931 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2352 117 533 Monolignol Biosynthesis Gene Families AT5G48930 28.770 2.80e-47 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2352 K19861 - gmx:100797017 583.948