Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2345 ATGCAGTTTGAGGAAGAACAACACTATGCTTCTCTCTCCAACTTACTTCCACACTTCGCCACCATTCCCACCATTCACAAAGCATGGCTTTTCAACAACACGCTCGGAATGTTTACTTTCACCCAACCTCATCTTTTAACCAACAAAACCAAAACTTCAATTCTCTCCTGTGAACTTGTTAAACAAGAAACCGATGTTAAGTTTCACTGGGCTCCGTTTCCAGTTCAGATGTCCGGTGTTGTTTCTATGATCGTTCCGTCTCCTTCTGGTTCTAAGCTTTTGGTCATTCGGAATCCGGAGACTAAAGAAGATGATGCTACTTCTTGTTTTCAGATTTGGAGTTCGTCGACCTTGGACAAGGAGTTTCATGTTCCTGAATCAATGCATGGTTCGGTTTATAATGATGGATGGTTTGAAGCTGTTTCTTGGAACTCGGATGAAACATTGATAGCATATGTAGCAGAAGAGCCCTCTTCTACAAAGCCAATATTTAACAATACAGGTTACATGAAAGGTGGTTGTGCAGAGAAGGATTGTGGAAGCTGGAAAGGTCAAGGGGACTGGGAGGAGGATTGGGGAGAAACATATTCTGCTAAAAGACAGCCTACACTTTTTGTTATCAACATCAACAGTGGAGAGGTACAAGCTGTCAAAGGAATTGACAAATCTTTGAGTGTTGGCCAAGTTGTATGGGCTCCATTTACCGAAAGCTCGAAACAGTGTCTTGTTTTTGTCGGGTGGTCATCTGAGGCAAGAAAGCTTGGTATGAAGTACTGCTCTAACAGGCCTTGTGCATTGTATGTGGTTAGAGCACCACATCATGAGTCAAAATCCGAGGAACTAGAGCACCACGCAACTGAAGAATTGCATGCACTGAATCTAACTCCAACAATAAGTAGTGCTCTTTTTCCGCGATTCAGTCCAAATGGAGAGTTTCTTGTATTTTTATCTGCAAAAAGTGCTGTGGATTCTGGACTGCACAATGCTACAAATTCACTTCATAGGATTGATTGGCCAACTAATGGGGAACTGTACCAATCCGCCAAAATTTACGACATCATTCCTGTTGTAATGTGTGCTGAGGATGTTCTACTTTCTGTGAATGTGTTGAGTGGGGAAGTATTACGTATCAGCCCAGAAGACTCAAATTTCTCGTGGAATCTTCTTACACTGAATGGGAACAATATTCTCGCCATTTCCAGCAATCCGGTCAATGTTCCTCAAATCATGTATGGAATTGAGAAGGCAAAGAGAAATACTACATGGAATTGGTCAAAGATATCCAGTCCCATATTCAAATGCTCTGACAAGGTTAGATCTTTGTTATCCTCTCTCCAGTGCAGTATACAGAAGATCTCAGTCACAGATGCTTCCAATGATCCAATGAAAGGTGCTGCTAAACCTTTTGAAGCTATATTTGTGTCATCCAAAACCAAGAACAAGGATTTATTTCATCCATTAATTGTGATCCTTCACGGAGGGCCGCAAGACGTCTCTTTGTCACACTTCTCCAAGTCTTGGGCGTTTCTATCTTCGGTTGGATATAGCTTGTTGATTGTAAATTACAGAGGTTCATTAGGATTTGGCGAGGAAGCACTACAGTCTCTTCCAGGGAAAGTCGGATCTCAGGATGTCAATGATGTTCTCTCTGCCATAGATCATGTGATCAACTTGGGTCTTGCCAGTCCATCCAAGATTACGGTGATGGGAATTTCACATGGTGGTTTTTTGACGACTCATTTGATTGGCCAGGCACCAGAGAAGTTTGTAGCAGCTGCAGCAATTAATCCTGTTTGTAACTTTGCATTGATGGTTGGTACAACCGATATCCCTGATTGGTGTTATGTAGAGGCATGTGGAACCATTGCAAGAAATCGGTTTAAGGAAACACTTTCAGCAGAAGATTTGTCTCTCTTCTATAGCAAATCTCCTATCTCGCACGTTTCAAAGGTAAAGGCACCAACACTTTTCCTTTTAGGTGCGCAAGATCGCCGCGTTCCAATCTTTGATGGACTGCAATATGCTCGAGCCTTAAAAGAGAAAGGATCAGAGGTCAAAATCATCATGTTTCAAAATGATGTTCATGCACTCAAAAGACCACAATCTGAATGGGAAAGCATCCTTAACATTGGGGTGTGGTTCAACAAATACTGCAAATAA 2160 0.4194 MQFEEEQHYASLSNLLPHFATIPTIHKAWLFNNTLGMFTFTQPHLLTNKTKTSILSCELVKQETDVKFHWAPFPVQMSGVVSMIVPSPSGSKLLVIRNPETKEDDATSCFQIWSSSTLDKEFHVPESMHGSVYNDGWFEAVSWNSDETLIAYVAEEPSSTKPIFNNTGYMKGGCAEKDCGSWKGQGDWEEDWGETYSAKRQPTLFVININSGEVQAVKGIDKSLSVGQVVWAPFTESSKQCLVFVGWSSEARKLGMKYCSNRPCALYVVRAPHHESKSEELEHHATEELHALNLTPTISSALFPRFSPNGEFLVFLSAKSAVDSGLHNATNSLHRIDWPTNGELYQSAKIYDIIPVVMCAEDVLLSVNVLSGEVLRISPEDSNFSWNLLTLNGNNILAISSNPVNVPQIMYGIEKAKRNTTWNWSKISSPIFKCSDKVRSLLSSLQCSIQKISVTDASNDPMKGAAKPFEAIFVSSKTKNKDLFHPLIVILHGGPQDVSLSHFSKSWAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLSAIDHVINLGLASPSKITVMGISHGGFLTTHLIGQAPEKFVAAAAINPVCNFALMVGTTDIPDWCYVEACGTIARNRFKETLSAEDLSLFYSKSPISHVSKVKAPTLFLLGAQDRRVPIFDGLQYARALKEKGSEVKIIMFQNDVHALKRPQSEWESILNIGVWFNKYCK* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2345 719 SUPERFAMILY alpha/beta-Hydrolases 485 718 IPR029058 -
Psa6g2345 719 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 6 276 IPR045550 -
Psa6g2345 719 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 362 719 - -
Psa6g2345 719 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 5 362 - -
Psa6g2345 719 Pfam Prolyl oligopeptidase family 502 718 IPR001375 GO:0006508|GO:0008236
Psa6g2345 719 Gene3D alpha/beta hydrolase 467 717 IPR029058 -
Psa6g2345 719 PANTHER ENZYME-LIKE PROTEIN, PUTATIVE-RELATED 362 719 - -
Psa6g2345 719 PANTHER ENZYME-LIKE PROTEIN, PUTATIVE-RELATED 5 362 - -
Psa6g2345 719 SUPERFAMILY DPP6 N-terminal domain-like 78 426 - -
Psa6g2345 719 ProSitePatterns Prolyl endopeptidase family serine active site. 547 577 IPR002471 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2345 Psa-Chr6 169263773 169268538 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2345 486 702 Carbohydrate Esterase AT5G36210 25.346 2.75e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2345 K01303 - gmx:100812681 1104.74