Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2322 ATGGAGTACATAAGGGCTATAAGAAGATATAATACTGGTCAACAAAAGCGTCAAAATATTCAACATCATGGCTTAACTGAAGATCATGTACGCTGGCACAAGACTGGTAAGACCAAAGCTGTAATAGAATATGGAGTACATAAGGGCTATAAGAAACATCATGGCTTAACTGAAGATCATGTACGCTGGCACAAGACTGGTAAGACCAAAGCTGTAATAGAATATGGAGTACATAAGGGCTATAAGAAGATCTTGGTTTTGTATATAAGATCTGGGAAAGATTCAAAATCCTACAAATCTGACTGGAAAATGCATCAGTACCATCCTGGGAATGATGAAGATGAGAAGAATGGAGAATATGTGTTTTCAAAAGTATTTTATAAACATAATGAAAAATGA 399 0.3534 MEYIRAIRRYNTGQQKRQNIQHHGLTEDHVRWHKTGKTKAVIEYGVHKGYKKHHGLTEDHVRWHKTGKTKAVIEYGVHKGYKKILVLYIRSGKDSKSYKSDWKMHQYHPGNDEDEKNGEYVFSKVFYKHNEK* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2322 132 SUPERFAMILY NAC domain 59 128 IPR036093 GO:0003677|GO:0006355
Psa6g2322 132 Pfam No apical meristem (NAM) protein 61 108 IPR003441 GO:0003677|GO:0006355
Psa6g2322 132 Gene3D NAC domain 54 132 IPR036093 GO:0003677|GO:0006355
Psa6g2322 132 ProSiteProfiles NAC domain profile. 1 128 IPR003441 GO:0003677|GO:0006355
Psa6g2322 132 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 5 52 - -
Psa6g2322 132 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 53 130 - -
Psa6g2322 132 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 53 130 IPR044799 GO:0003700
Psa6g2322 132 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 52 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2322 Psa-Chr6 167027025 167027423 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2322 61 128 NAC Transcription Factor Family AT1G28470 57.353 4.33e-21 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2322 - - mtr:MTR_7g033320 152.14