Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2296 ATGTCGATGGGATCCAAGGCTCTTCGAACTCTCCAGCCTATCAAATCATTGCCTCCTGGATTCAAGGTTAATGGTAATCTGACCCGTGATGGAATGGAAAGCCGGGGTGACACTAAATTGAGGAGTAGTGGTTTGGTTGGGTCAAGTAGTCCTGAAAATGATGCTCTTTCTGAAGAAGGTGAAGATCGTACGGGTGACATGGGTCTTTTCAACGAGGACTTAGCATATAGTGGAAAAGTTGCAGATGAAGACTTGGAATCTGTTCCTCTTCCATTCCAATCAATTTCAGCGTCCTCTAGGGAATTGAGGTGGAGTGATACAACGCCTTATGTTTCAAAGAAGAAGCTTCAGTCTTGGTTTCAACTTTCAAATGGGAATTGGGAGCTGGCAAAAATAATAACAACTTCTGGAAAAGAATTAGTTATTTCATTGCCTGATGGGAAGGTTTTAAAAGTGAAACAAGACAGTTTGGTACAAGCAAATCCTGATATTCTTGATGGAGTGGATGACCTCATGCAACTTAGTTATTTAAACGAACCGTCAGTTTTATATGATCTACAATATAGATACAATCAAAATATGATTTATACAAAAGCGGGTCCTGTTTTGGTCGCTATAAATCCTTTCAAGAAAGTTCCTCTGTACGGTAACAATTATATTGAAGCCTACAGACGTAAGACAACTGAAAGCCCACATGTATATGCAATTACAGACACAGCAATCCGAGAAATGATACGAGATGAAGTTAATCAATCTATAATTATCAGTGGTGAGAGTGGAGCTGGAAAGACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCTCTTGGAGGCGGAAGTGGAATAGAGCATGAGATATTGAAGACTAATCCAATACTAGAAGCCTTTGGTAATGCAAAAACTTTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATTCACTTCAGTGAAACTGGAAAAATTTCTGGTGCTAATATTCAAACATTTTTGCTTGAAAAGTCTAGAGTTGTTCAATGCAATGAAGGGGAAAGGTCATATCATATATTTTATCAGTTATGCGCTGGTGCACCACCATCTCTTCGGGAGAAGCTCAACCTAAAAAATGCAGAAGATTATAAATATTTGAAGCTGAGTAATTGTTATTCAATTACTGGTGTTAACGATGCTGAAGAGTTTCGCATAGTCATGGAAGCTCTTGATGTTGTCCACATCAGTAAAGAAGACCAAGAGACTGTATTTGCTATGCTTGCTGCAGTATTATGGCTAGGGAACATATCATTTACCGTCATTGATAATGAAGACCATGTTCAAGCGGTAGAAAATGAGAGTTTGTTACACGTCGCCGAATTGATTGGCTGTGACCTAAAAGATCTCAAGTTGACTCTATCAACTCGCAACATGAAAGTTGGTAATGATAAGATCGTCCAGAAGTTGACATTATCACAGGCAATTGATGCAAGAGATGCTTTGGCAAAGTCTATATATTCATGCCTGTTTGATTGGTTGGTTGATCAAATAAATAAATCACTTGCTGTTGGCAAAAGACGTACTGGCAGATCAATCAGTATTCTAGATATATACGGCTTTGAATCATTCAATAGGAACAGTTTTGAGCAATTCTGCATAAATTATGCAAATGAAAGATTGCAACAACACTTCAATCGTCATTTATTTAAGTTAGAACAGGAGGAATACATTCATGATGGCATTGACTGGGCTAAAGTTGAATTTGAAGACAATCAAGACTGCCTTAATCTTTTTGAAAAGAGGCCATTGGGGTTATTATCCCTGTTAGATGAAGAGTCCACTTTTCCAAATGGCACAGATTTGACATTTGCCAACAAGCTTAAACAGCATTTAAATTCCAAATCTTGTTTCAAAGGAGAAAGAGACCAAGCCTTTACAGTGTGTCATTATGCTGGAGAGGTCACTTATGATACAACTGGGTTTCTGGAGAAGAATAGGGACCTATTGCACTTGGATTCCATCCAACTTCTATCCTCATGCACATGTCATCTTCCTCAAATATTTGCATCTCATATGCTTACACAGTCTGAAAAGCCAGTAAATGGCCCTTTGCACAAGTCAGGTGGGGCAGATTCCCAAAAGCTAAGTGTTGCAACAAAATTCAAGGGTCAGTTGTTCCAACTAATGCAACGCTTAGAGAGCACAACTCCACATTTTATTCGCTGCATTAAACCCAACAATCTCCAATCACCTGAATCATATGAACAAGGGCTTGTACTGCAACAGCTGAGATGCTGTGGGGTGCTGGAAGTGGTTCGAATATCGAGATCCGGCTTTCCGACAAGAATGTCTCACCAAAGGTTTGCCAGAAGATATGGCTTTCTTCTCCTTGATAGTGCTGCATCTCAGGATCCACTTGGTGTTTCAGTTTCAATTCTTCATCAATTTAATATTTTGCCTGAGATGTATCAAGTTGGCTACACAAAATTATTTTTCCGAACAGGACAGATTGGTGTGCTTGAAGATACTAGAAATCGTACCCTTCATGGCATCTTACGTGTGCAAAGTTGTTTTAGGGGTTACCAAGCTCGTCATTCTCTCAAGAAGCTTCAAGGAGGAATCTCTACTTTGCAGTCATTTATTCGGGGAGAGAAAACAAGAAAGGAATATGCTGCTTTGCTTCAGAGACATAAAGCTGCTGTTATTATACAGAAACAGATAAAAGCTGTGTTTGTAAGAAACAAAGTTCAGACTGTTAAAGATGCTACAATTGTCATACAATCAGTCATTCGTGGATGGTTGGTAAGAAGATGCTCAGGGGATATTGGATTTTTGAAATATGGGGACATAAAGACACAAGATTCGGATGAGATTCTGGTCAAGTCATCTTTTCTGGCTGAATTACAGCGCCGGGTACTTAAGGCTGAAGCTGCCCTGAGAGAGAAAGATGAAGAAAATGACATCCTTAACCAACGTATCCAACAATACGAGAACAGATGGTCTGAGTATGAGTCGAAGATGCAATCCATGGAAGAAGTGTGGCAGAAACAAATGAGATCCCTTCAATCTAGCCTCTCCATTGCTAAGAAGAGCCTTGCTATTGATGACTCTGAAAGAAATTCAGACGCATCTGTTAATAATACAAGCGATGAGCGTGATTACAGCTGGGATGGGGGAAGTAATCACAGGCGCCAAGAAAGCAATGGGACAAGATCGACGAGTGCTAGTTTGAGTGTAATAAGCCGACTTGCTGAAGAATTTGAGCAAAGGAGTCAAGTATTTGCTGATGATGCCAAGTTCTTGGTTGAGGTGAAATCTGGTCAAGTAGAAGCAAGTTTGAACCCAGATCAAGAACTTAGAAGGTTAAAACAGATGTTTGAAGCTTGGAAAAGGGATTACACTGCAAGATTGCGTGAAACAAAGTTGATTATAAATAAACTTGGAACTGAAGATGGTGCAATTGAGAAAATGAGGAAAAAGTGGTGGGGAAGAAGGAACAGTACACGGATAAATTGA 3495 0.3963 MSMGSKALRTLQPIKSLPPGFKVNGNLTRDGMESRGDTKLRSSGLVGSSSPENDALSEEGEDRTGDMGLFNEDLAYSGKVADEDLESVPLPFQSISASSRELRWSDTTPYVSKKKLQSWFQLSNGNWELAKIITTSGKELVISLPDGKVLKVKQDSLVQANPDILDGVDDLMQLSYLNEPSVLYDLQYRYNQNMIYTKAGPVLVAINPFKKVPLYGNNYIEAYRRKTTESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEHEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLREKLNLKNAEDYKYLKLSNCYSITGVNDAEEFRIVMEALDVVHISKEDQETVFAMLAAVLWLGNISFTVIDNEDHVQAVENESLLHVAELIGCDLKDLKLTLSTRNMKVGNDKIVQKLTLSQAIDARDALAKSIYSCLFDWLVDQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIHDGIDWAKVEFEDNQDCLNLFEKRPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSKSCFKGERDQAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCTCHLPQIFASHMLTQSEKPVNGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPESYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQRFARRYGFLLLDSAASQDPLGVSVSILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGYQARHSLKKLQGGISTLQSFIRGEKTRKEYAALLQRHKAAVIIQKQIKAVFVRNKVQTVKDATIVIQSVIRGWLVRRCSGDIGFLKYGDIKTQDSDEILVKSSFLAELQRRVLKAEAALREKDEENDILNQRIQQYENRWSEYESKMQSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASVNNTSDERDYSWDGGSNHRRQESNGTRSTSASLSVISRLAEEFEQRSQVFADDAKFLVEVKSGQVEASLNPDQELRRLKQMFEAWKRDYTARLRETKLIINKLGTEDGAIEKMRKKWWGRRNSTRIN* 1165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2296 1164 Gene3D Kinesin motor domain 169 767 IPR036961 -
Psa6g2296 1164 ProSiteProfiles IQ motif profile. 842 869 IPR000048 GO:0005515
Psa6g2296 1164 MobiDBLite consensus disorder prediction 19 64 - -
Psa6g2296 1164 MobiDBLite consensus disorder prediction 1054 1068 - -
Psa6g2296 1164 Pfam Myosin head (motor domain) 168 826 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa6g2296 1164 Pfam IQ calmodulin-binding motif 914 930 IPR000048 GO:0005515
Psa6g2296 1164 Pfam IQ calmodulin-binding motif 844 860 IPR000048 GO:0005515
Psa6g2296 1164 Pfam IQ calmodulin-binding motif 867 883 IPR000048 GO:0005515
Psa6g2296 1164 Gene3D - 534 728 - -
Psa6g2296 1164 Gene3D Myosin VI head, motor domain, U50 subdomain 409 706 - -
Psa6g2296 1164 Gene3D - 348 407 - -
Psa6g2296 1164 PANTHER MYOSIN 9 1164 - -
Psa6g2296 1164 SMART iq_5 911 933 IPR000048 GO:0005515
Psa6g2296 1164 SMART iq_5 888 910 IPR000048 GO:0005515
Psa6g2296 1164 SMART iq_5 839 861 IPR000048 GO:0005515
Psa6g2296 1164 SMART iq_5 862 884 IPR000048 GO:0005515
Psa6g2296 1164 Gene3D - 842 890 - -
Psa6g2296 1164 Gene3D - 891 932 - -
Psa6g2296 1164 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 886 IPR027417 -
Psa6g2296 1164 CDD MYSc_Myo8 180 826 IPR036022 -
Psa6g2296 1164 ProSiteProfiles Myosin motor domain profile. 166 838 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa6g2296 1164 ProSiteProfiles IQ motif profile. 863 892 IPR000048 GO:0005515
Psa6g2296 1164 MobiDBLite consensus disorder prediction 1031 1047 - -
Psa6g2296 1164 SMART MYSc_2a 160 839 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa6g2296 1164 Gene3D - 771 839 - -
Psa6g2296 1164 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 9 1164 - -
Psa6g2296 1164 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 113 162 IPR004009 GO:0003774|GO:0005524|GO:0016459
Psa6g2296 1164 PRINTS Myosin heavy chain signature 196 215 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa6g2296 1164 PRINTS Myosin heavy chain signature 250 275 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa6g2296 1164 PRINTS Myosin heavy chain signature 292 319 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa6g2296 1164 PRINTS Myosin heavy chain signature 524 552 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa6g2296 1164 PRINTS Myosin heavy chain signature 577 605 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa6g2296 1164 MobiDBLite consensus disorder prediction 1029 1068 - -
Psa6g2296 1164 Coils Coil 958 1006 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2296 Psa-Chr6 164640289 164654812 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2296 3 1162 Myosins gene family AT1G50360 72.828 0.0 1749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2296 - K10357 gmx:100781736 2023.05