Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2291 ATGTCTAACTCCAAGGAAACATCTAACGCCGTCACAACAGACCCAGAACTCACAAACCAAACCGCCATAACCGTTAAAAAACCACCGTCAAAAGACCGTCACAGCAAAGTTGACGGACGCGGTCGAAGAATACGCATGCCAATAATATGCGCCGCACGTGTCTTCCAGTTAACACGTGAGCTCGGTCATAAATCCGACGGTCAAACCATCGAATGGCTTCTCCGTCAAGCCGAGCCCTCCATCATCGCCGCCACTGGTACCGGAACTACTCCCGCTTCTTTCTCTTCTCTCTCCGAGCATAAACCGTTTCTCTCTCCTTCTCCCTTCATTCTCGGTAAACGGTTACGTTCCGACCACGACGATGTTTCGATTGCGGCTCCTACTGCTCCTCCTGCTTTATGGAGGCCGGATTTCGCTCAGCTTTGGAGTTTCGCTGCGGCGGCTCAACCTCCGCCGGATGTTCTTTCCATTTCTCCCAATCAGCATCAGCATAGTTCGCTGTTCCATCATCAGCAGCAACAGCAACAACAGCAGCAACATCAACAACAAGGTTCTATGGGAGAAGCTTCCGCGGCGAGGCTAGGGAATTATCTTCCCGGACATCTGAATTTGCTGGCTTCATTGTCAGGTGGTAATGGAAACTCCGGCCGGGGAGACGATGAGGATCGTTGA 672 0.5179 MSNSKETSNAVTTDPELTNQTAITVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSLSEHKPFLSPSPFILGKRLRSDHDDVSIAAPTAPPALWRPDFAQLWSFAAAAQPPPDVLSISPNQHQHSSLFHHQQQQQQQQQHQQQGSMGEASAARLGNYLPGHLNLLASLSGGNGNSGRGDDEDR* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2291 223 MobiDBLite consensus disorder prediction 162 189 - -
Psa6g2291 223 MobiDBLite consensus disorder prediction 1 41 - -
Psa6g2291 223 MobiDBLite consensus disorder prediction 27 41 - -
Psa6g2291 223 MobiDBLite consensus disorder prediction 1 26 - -
Psa6g2291 223 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 219 IPR005333 GO:0003700
Psa6g2291 223 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 219 - -
Psa6g2291 223 ProSiteProfiles TCP domain profile. 30 84 IPR017887 -
Psa6g2291 223 Pfam TCP family transcription factor 30 182 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2291 Psa-Chr6 164478648 164481498 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2291 17 223 TCP Transcription Factor Family AT5G23280 58.898 7.93e-77 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Psa6g2291 TCP 7.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2291 K16221 - gmx:100786264 246.514