Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2289 ATGTTGTTTAATTTTCATGAACAGTTGAAGCCAGTTTTGGTTATGATTATAGTTAATTTAGCTTTATCCGTTGTGAATGTATTTTTGAAGAAAATTTTAAATGAAGGAATGGATCATTTAACCATTTTAACATATCGACAAGCAATTGCATCCATTTTCTTAGCACCTATTGCTTGCATCTTTGAAAGGGAAAGCAAGATTGATAGGCATATAATATGTCTCCTTTTCTTTAGTGCTCTTGTAGGAGTAACACTCACACAACATCTCTATCTTCTGGGACTAGAATACACATCAGCAACTTTCTCATGTGCATTTCTCAATATAATGCCTGTATTCACATTCATTATGGCTCTCCCTTTGGGGATGGAGAAAGTGAGCATGCAAAGCAAGAGTGCAAAAGCCAAAGTCTTGGGAACTTTTGTGTGTATTGGTGGAGCTTTGATATTGATCCTTTACAAAGGAATTCCCTTAATCAACCCACAATCTCATAAAGTTACAACACCAGCATCAGCCTCCAGTTTAAAGAAATGGATTATAGGTTCAATATTTCTGACTGCATCTTGCGTCTTCTGGTCTTCATGGTTTCTTATACAAGAAAAGGTTGGCAAAAAGTATCCATATCGATACTCTAGCACAGCCATTACATCGTTCTTTGCTACCATTCAATCCGCAATATTAAACTTGATCATCCATCGAAACAACGCCAAATGGATTCTCAAAGGAAAGCTACAGATAATGACTGTTGTATATTCCGGTTTGGTGGGATCTGGCTTATGCTATGTGGCAATGGCATGGTGTGTCAAACAAAAGGGTCCGGTATTCACGGCAGCATTTGCACCACTTTTACAGATGTTTGTGGCTGTGCTTGATCTTTGTATATTACAAGAGGAGATTTATCTAGGAAGTGTTGTAGGATCAGTCTTTGTTATTTCTGGCATGTATATGCTCCTATGGGGTAAAAGTAAAGAGAGAGAGCAGTGTGCCTTGAAGGACATTCCAGAAAGCCAAAAGGATGAAGAATGTCACTAA 1029 0.378 MLFNFHEQLKPVLVMIIVNLALSVVNVFLKKILNEGMDHLTILTYRQAIASIFLAPIACIFERESKIDRHIICLLFFSALVGVTLTQHLYLLGLEYTSATFSCAFLNIMPVFTFIMALPLGMEKVSMQSKSAKAKVLGTFVCIGGALILILYKGIPLINPQSHKVTTPASASSLKKWIIGSIFLTASCVFWSSWFLIQEKVGKKYPYRYSSTAITSFFATIQSAILNLIIHRNNAKWILKGKLQIMTVVYSGLVGSGLCYVAMAWCVKQKGPVFTAAFAPLLQMFVAVLDLCILQEEIYLGSVVGSVFVISGMYMLLWGKSKEREQCALKDIPESQKDEECH* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2289 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 153 - -
Psa6g2289 342 PANTHER WAT1-RELATED PROTEIN 10 342 IPR030184 GO:0016021|GO:0022857
Psa6g2289 342 PANTHER WAT1-RELATED PROTEIN 10 342 - -
Psa6g2289 342 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020|GO:0016021
Psa6g2289 342 Pfam EamA-like transporter family 179 317 IPR000620 GO:0016020|GO:0016021
Psa6g2289 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2289 Psa-Chr6 164445854 164448622 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2289 11 325 Nodulin-like Gene Family AT1G11460 41.433 7.91e-82 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2289 - - gmx:100794199 522.702