Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2285 ATGAAGAAACTTTCTTTCTCCTTCCCTTCATCAAAATCTTCATCCAAGTCTAACAATTCCGTCAAACCCTCCCAAACCTTCGACCAAGATTCTTCCACCAATCAACAACATCTTCAAAAACACTTAATCACCGAATTCGACCCTTCCAATCTCCAAACCCTAGACTCAAATCCCAAAGCCCTAATTCCCCCAATCGAAAACCAATGGCGTCCGTACAAAAAAATGAAGAACCTCGACCTTCCTTTAACCGATTCACACTCTTCCCATTCCCTTACTTTCGAACCCGACGCTTCTTCGATCTCCGATCAACCGGAATCCGACAAGTCGTCGTACGGTCTCAACCTCCGTTCCGCGAATTCTGAAAATAAAAAGCAGGAAGCTGGTGGGGATGCTTTGAGGCCCAGAATTTCTATTGAGGTTAACATGATGCAGAAGTTTAAGGAAGATATGGAGAGGCTTCCTGATGATCAGGGGTTTGATGAGTTTAAGGATGTTTCGGTGGATGGTTTCGGTGCGGCCCTTTTGGGTGGGTATGGATGGAAAGAAGGAATGGGGATTGGGAAGAATGCTAAGGAGGATGTTAAGGTTGTTGAGGTTAAGAGGAGGACTGCTAAGGAGGGTTTGGGTTTTGTTGCTGATTTGCCTCCTCCTACTTCGAAGAAGGGAGAAAGGAATGGGAAGGTGGAGAGTGAGAAGAGGAAGAAGGAGGAGAAAGTTGTGAGAATTGTCCGAGGTAGAGATGTTGGATTGAAGGCTAGTGTTGTAGGTAAAATTGGGGATGATGTTTTTGTTTTGAAGGTTTTAGGGAGTAGTGAGGAAGTTAAGGTTAGGGTAGATGATGTTGCTGAATTGGGTTCTGTTGAAGAAGATAGGTGTTTGAGAAAGTTGAAGGATTCGAAGGTTAAACACCATGAGGAGGAAAGAGGGTCTCGTAGTAAGCGTGGGAAGGATGAGGTGAAAGAAAGGAGAGTGGATGGTAATCGTGATGGTAAGGATGAGAGGGGGAAGAAACAGGTTCCTTGGCTTACAAGTCATATTCGGGTTAGGGTGGTTAGTCGGAGTTTTAAAGGGGGGAGATTTTATTTGAAGAAGGGTGAGGTTTTGGATGTTATTGGGCCTACTACTTGTGACATATCTATGGATGAGAGTAGGGAGATTATTCAAGGAGTGTCCCAAGATATGCTCGAGACGGCTATTCCACGACGAGGGGGGCCTGTTCTTGTATTGCATGGGAAACATAAGGGTGCTTTTGGGAGTCTTGTTGAAAGGGATTTGGATAGGGAGATTGGTATTATTAGGGATGCTGATACCCATCAGATGCTCAATGTCAAACTTGAACATATGGCAGAGTATATAGGGGACCCAAGCTTATTGGGACATTGA 1383 0.4469 MKKLSFSFPSSKSSSKSNNSVKPSQTFDQDSSTNQQHLQKHLITEFDPSNLQTLDSNPKALIPPIENQWRPYKKMKNLDLPLTDSHSSHSLTFEPDASSISDQPESDKSSYGLNLRSANSENKKQEAGGDALRPRISIEVNMMQKFKEDMERLPDDQGFDEFKDVSVDGFGAALLGGYGWKEGMGIGKNAKEDVKVVEVKRRTAKEGLGFVADLPPPTSKKGERNGKVESEKRKKEEKVVRIVRGRDVGLKASVVGKIGDDVFVLKVLGSSEEVKVRVDDVAELGSVEEDRCLRKLKDSKVKHHEEERGSRSKRGKDEVKERRVDGNRDGKDERGKKQVPWLTSHIRVRVVSRSFKGGRFYLKKGEVLDVIGPTTCDISMDESREIIQGVSQDMLETAIPRRGGPVLVLHGKHKGAFGSLVERDLDREIGIIRDADTHQMLNVKLEHMAEYIGDPSLLGH* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2285 460 MobiDBLite consensus disorder prediction 89 124 - -
Psa6g2285 460 Pfam G-patch domain 154 211 IPR026822 -
Psa6g2285 460 MobiDBLite consensus disorder prediction 1 57 - -
Psa6g2285 460 Gene3D - 345 399 - -
Psa6g2285 460 PANTHER G PATCH AND KOW-CONTAINING 1 458 IPR045166 GO:0000398
Psa6g2285 460 MobiDBLite consensus disorder prediction 220 235 - -
Psa6g2285 460 MobiDBLite consensus disorder prediction 1 59 - -
Psa6g2285 460 MobiDBLite consensus disorder prediction 214 235 - -
Psa6g2285 460 MobiDBLite consensus disorder prediction 89 131 - -
Psa6g2285 460 ProSiteProfiles G-patch domain profile. 167 213 IPR000467 GO:0003676
Psa6g2285 460 SMART G-patch_5 165 211 IPR000467 GO:0003676
Psa6g2285 460 MobiDBLite consensus disorder prediction 300 337 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2285 341 427 C2H2 Transcription Factor Family AT1G55460 32.184 1.33e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2285 K13101 - gmx:100784983 495.738