Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa6g2279 | ATGGCTGCTCAACTCACTTATTTTGTTGGATCTCATGTTTGGGTTGAGGACACTGATCAAGCTTGGTTAGATGGAGAAATTCTTGAATCTAAAGATAACGAGATCACCGTTAGCTTTGAATCAGGAACAAAGGTTGTGAGCAAATCAGCTAATATATACCCGAAAGATCCTGAGTTTCCACCTAACGGAGTGGAAGATATGACACGACTTGCATATCTGCATGAACCGGGAGTACTTCAGAATTTGCAAATTCGTTATACCCTCAATGATATATATACATACACAGGAAACATCTTGATAGCAGTGAACCCTTTTCAAAGGTTACCTCATTTGTATGCGGCTGATACAATGGCAAAGTATAAAGGCGTGTCTTTTGGTGAGCAGAGTCCACATCCTTTTGCAATTGCAGGTTATGCATATAGGAAGATGATAAACGAAGAAAAAAGCCAGGCAATTTTGGTTAGTGGAGAAAGTGGAGCCGGTAAAACAGAAAGCACAAAGATGCTTATGCATTATCTTGCTTATTTGGGAGGGAGAGCAGCAACTGAGGGACGGTCTGTCGAGCAACAAGTTCTCGAGTCCAATCCTGTTTTAGAAGCATTTGGGAATGCAAAGACAGTTAGGAATAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATCGAAAGGGGAGAATTTCAGGAGCTGCTATCAGAACGTATTTGCTAGAGCGATCACGCGTTTGTCAAGTTTCTGATCCCGAGAGAAATTATCATTGCTTTTATATGCTTTGTGCTGCGCCAAAAGAGGATGTTGAACGGTTCAAATTGGGAAATCCGAGATCCTTTCATTATCTTAATCAATCAAATTGCTATGAACTGGATGCGTTGGATGATTCAAAGGAGTACCTTGCAACAAGGAGAGCCATGGAAGTTGTTGGAATCAGCGCTGATGAAACAGATGCGATCTTTCGAACAGTAGCTGCTGTACTTCATTTAGGAAACATTGAATTTGTTAAAGCAGTGGATGAAGGAATGGATTCCTCTAAACCTAAAGATGACAAATCTTATTTCCACCTAAAAACCGCAGCTGAACTTTTGATGTGCGATGAAAAGTCCCTTGAAGACTCTTTTTGCAAACGCCTTATAGTGACTCGTGGTGAGGCTATAACAAAATGCCTTGATCCAAATTCTGCAGCTCTCAGTCGAGATGCATTGGCTAAAATTGTTTATTCAAGGCTTTTTGACTGGATTGTGGACAAGATTAACAACTCTATTGGACAAGATCCAACTTCGAAGAACTTAATTGGAGTTCTAGATATATACGGATTCGAGAGTTTCAAGACAAACAGCTTCGAGCAATTTTGTATCAATTTGACAAATGAGAAGTTACAGCAGCATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAAATTGATTGGAGTTATATAGAGTTCGTTGATAATCAAGATGTTCTCGATCTTATTGAGAAGAAACCTGGCGGCGTTATTGCTCTTCTGGACGAGGCCTGTATGTTTCCAAGATCAACGCACGAAACATTTGCTGAAAAGCTATATCAAACACTTAAGGACAATAAGCGATTCAGCAAACCGAAGTTGTCACGAATCCTGACTTACCTTCAATTCCTTTGCTGGTGTGACTTTTCCCACCTTTACACGAGGAAAGTACTAATATCAATAAAGTTTTCTTCTATAGCCACTCAGTTTAAGATAGGAAAGACAAAAGTTTTCCTGAGAGCAGGTCAAATGGAAGAACTAGATGCATGCCGTGCCGAGGGTGTAATGGAGGCAATTAGGATAAGTTGCGCTGGATATCCAACTCGAAAGAACTTTGATGAATTTGTTCATCGGTTTCGTATAATGGAACCTAAGGTTCTAAAATCATGTCCTGATGAGATGACGGCTTGCAAGAGACTTCTAGATAAAGCAAACCTTAAAGATTATCAGATAGGAAAGACAAAAGTTTTCCTGAGAGCAGGTCAAATGGCAGAACTAGATGCATGTCGTGCCGAGGTCCTAGGAAGATCCGCAATCGTTATTCAGAAAAAAGCTCGCACTCTTAGACTTTTCCCACCTTTACACGAGGAAAGTACTAAATCAACAAAGTTTTCTTCTATAGCCACTCAGTTTAAGCAACAACTGCAATCTTTGCTTGAAACATTGAGTGCGACTGAGCCACACTACATTCATTGTGTAAAGCCAAATAATCTTCTTAAGCCGGGGATATTTGAGAACAACGATGTGTTACAACAGCTTCGATGTGGGGGTGTAATGGAGGCAATTAGGATAAGTTGCGCTGGATATCCAACTCGAAAGAACTTTGATGAATTTGTTCAGCGGTTTAGTATATTGGAACCTAAGGTTCTAAAATCATGTCCTGATGAGATGACGGCTTGCAAGAGACTTATAGATAAAGCAAACCTTAAAGGTTATCAGGTAGTAGTTCTTATCTTAATCTCAGTTATAGTATTTTTATTTGCTCGCAGGGAAAGGGACATAAAGTTTTCATCTGAGAGCAGCGCTTCAAATGGCAGAACTGATGCATGTCGTGCGCGCGGGGTCCTAGGAAGTCCGCAATCGTTATTTGATTCAGAAAAAGCTCGCACATATATTTGTGTGAAAACGACAACTTGCAAGACAGTCGGTTTGATGAGAAGGGAGGCCGCATCTTTGATAATCCAGAAACAAATCCGCATGTATCTTTCGAGAAGTGCTTATAAAACTACCTATTCCAAAGCTGTTTGTATTCAAACCGGCATGCGGGGAATGGCTGCTAGAAATGAACTTCGATTCAGGAAGCGGACACACGCTGCAACTGTTATTCAGGGTTACTACAGATGTTATTTAGCTCATACTTATTTCCAAAGGCTAAAGAAAGCAACAATCGCAATGCAGTGCTCCTGGAGGAGAACACGAGCACGAAGAGAACTTCGAAAGCTTAAAATGGCTGCTAAGGAATCCAAGGCCCTAGAAGCCGCGAAAATTCATCTAGAAAAGCAAGTTGAGGAACTATCTGAGTGTCTAGAGACAGAGAAGAGAATGAGGGAAGCCAAGACACAGGAAAATGAAAAATTACAATGTGCTTTGGAAGAGATGGAGCTTCAGTTCAAAGAAACTAAATCGGAGCTCATTCAGGAACGCGAGGCTGCAAAGAAATTAGCTGAACAAGTTCCAACTTTACTGGAAAATAATGTTGCTAATAATGAATTGATCAATAAACTTACTGCAGAAAATGAACAACTCAAGGATCAGGTTAGTTCATTGGAAAGAAAAATTGACGAGACAGAAAAGAAATATGAAGAAACTAGCACGATTAGTGAGGAGCGGATGAATCAAATTATAGAAACAGAATCAAAGATGATTGAGCTAAAGACAAACATGCAAAGGCTTGAAGAAAAACTTTCTGATATGGAAACCGAGAATCAAATTTTCCGAAAGCAAACGCTATTGACCTCATCATCCAAGAGAATAACACCTGCTGCAATTCCGCCCTTGGAAAATGGTCATCCGGTTGCAGTAAAAACACTTGGTTCAGAATCTGTGAGGAGATCTCATATGGAGAGGCATCAAGAGAGTGTAGATGCTCTTTTCAAGTGTGTGGTAAAAGATATCGGGTTCTCTGATGGGAAACCTGTTGCGGCATTTACCCTTTATAACTGTTTGCTACATTGGAAATCTTTTGAAGCAGATAAGACAAGTATCTTTGATCGTCTTATTCAGCTGATCGGTTCTGCAATAGAGGATCAGGATAATGACAATTGTATGGCTTATTGGCTGTCCAATACATCTGCTTTGTTTTTTCACCTTCAACGATGTTTAAGAGCACCGGCACGAAAACCACCCACTCCAACAGGGTTTTTTGGAAGAGTGACTCAGGGTTTCCGCTCATCGAATAGTCTTTCGAGTGGTTCGTTTGATGTAGAACATCAAGTTGAAGCAAAGTATCCAGCTTTGCTTTTCAAGCAACAGCTTGCAGCTTACGTGGAAAAGATATATGGAATCGTTCGAGAAAATATGAAGAAAGAATTGTCCCCTCTACTTTCTACTTGCATAGAGGAGCAGAGAACACGAAACGACGACAGCCAACCATCTGGTTCATGGCTCAAAATTATTGAATGCCTTGATAGATTTCTCAAGATTCTAAAAGAAAATTATGTGCCTCCTATTCTAATTCAAAAGGTATTTAATCAGACGTTTCAATATATTAACGCAGAAATATTTAACAGCCTTCTATTGCATAAAGAATGCTGCACATTCAACTCTGGAGAATATATAAAATCAGGGTTAGCTGAACTAGAATTATGGTGTACTGAAGTAACCGAAGAGTATGCTGGCTCGTCTTTGGATGAACTCAACCATTCAAAACAAGCAGTTAGATTCTTGGTTTCTCAAGAGAAGGACGAAATATCCTACGATGATCTTACAAATGACATCTGCCCGGTCTTGAGTTCTCAACAGCTTTATAGATTATGTACACTATACTCGAACGAAAATGAAAATGAGAACTCCAAAAGTGTATCAACAGATGTAACTACTAGAATAAAACTGCTAATGACAGACGATGTAGGCGAAGATGACAAATCCTTCTTGTTGGAAGACAATTCAAGTCTTCCTATCATTGTTGAAGAGGTTTCGCATTCTCAAAAAGATAAGACAATTCCGAAAGTAAAACCGCCTTCGGAACTACTCGAGAGTGCATCCTTCCAATTCTTACATGATTATAGTTAA | 4755 | 0.3971 | MAAQLTYFVGSHVWVEDTDQAWLDGEILESKDNEITVSFESGTKVVSKSANIYPKDPEFPPNGVEDMTRLAYLHEPGVLQNLQIRYTLNDIYTYTGNILIAVNPFQRLPHLYAADTMAKYKGVSFGEQSPHPFAIAGYAYRKMINEEKSQAILVSGESGAGKTESTKMLMHYLAYLGGRAATEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDRKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPKEDVERFKLGNPRSFHYLNQSNCYELDALDDSKEYLATRRAMEVVGISADETDAIFRTVAAVLHLGNIEFVKAVDEGMDSSKPKDDKSYFHLKTAAELLMCDEKSLEDSFCKRLIVTRGEAITKCLDPNSAALSRDALAKIVYSRLFDWIVDKINNSIGQDPTSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGVIALLDEACMFPRSTHETFAEKLYQTLKDNKRFSKPKLSRILTYLQFLCWCDFSHLYTRKVLISIKFSSIATQFKIGKTKVFLRAGQMEELDACRAEGVMEAIRISCAGYPTRKNFDEFVHRFRIMEPKVLKSCPDEMTACKRLLDKANLKDYQIGKTKVFLRAGQMAELDACRAEVLGRSAIVIQKKARTLRLFPPLHEESTKSTKFSSIATQFKQQLQSLLETLSATEPHYIHCVKPNNLLKPGIFENNDVLQQLRCGGVMEAIRISCAGYPTRKNFDEFVQRFSILEPKVLKSCPDEMTACKRLIDKANLKGYQVVVLILISVIVFLFARRERDIKFSSESSASNGRTDACRARGVLGSPQSLFDSEKARTYICVKTTTCKTVGLMRREAASLIIQKQIRMYLSRSAYKTTYSKAVCIQTGMRGMAARNELRFRKRTHAATVIQGYYRCYLAHTYFQRLKKATIAMQCSWRRTRARRELRKLKMAAKESKALEAAKIHLEKQVEELSECLETEKRMREAKTQENEKLQCALEEMELQFKETKSELIQEREAAKKLAEQVPTLLENNVANNELINKLTAENEQLKDQVSSLERKIDETEKKYEETSTISEERMNQIIETESKMIELKTNMQRLEEKLSDMETENQIFRKQTLLTSSSKRITPAAIPPLENGHPVAVKTLGSESVRRSHMERHQESVDALFKCVVKDIGFSDGKPVAAFTLYNCLLHWKSFEADKTSIFDRLIQLIGSAIEDQDNDNCMAYWLSNTSALFFHLQRCLRAPARKPPTPTGFFGRVTQGFRSSNSLSSGSFDVEHQVEAKYPALLFKQQLAAYVEKIYGIVRENMKKELSPLLSTCIEEQRTRNDDSQPSGSWLKIIECLDRFLKILKENYVPPILIQKVFNQTFQYINAEIFNSLLLHKECCTFNSGEYIKSGLAELELWCTEVTEEYAGSSLDELNHSKQAVRFLVSQEKDEISYDDLTNDICPVLSSQQLYRLCTLYSNENENENSKSVSTDVTTRIKLLMTDDVGEDDKSFLLEDNSSLPIIVEEVSHSQKDKTIPKVKPPSELLESASFQFLHDYS* | 1585 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa6g2279 | 1584 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 312 | 424 | - | - | |
| Psa6g2279 | 1584 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 699 | 711 | - | - | |
| Psa6g2279 | 1584 | Gene3D | - | 252 | 310 | - | - | |
| Psa6g2279 | 1584 | SMART | iq_5 | 917 | 939 | IPR000048 | GO:0005515 | |
| Psa6g2279 | 1584 | SMART | iq_5 | 894 | 916 | IPR000048 | GO:0005515 | |
| Psa6g2279 | 1584 | SMART | iq_5 | 942 | 964 | IPR000048 | GO:0005515 | |
| Psa6g2279 | 1584 | SMART | iq_5 | 965 | 987 | IPR000048 | GO:0005515 | |
| Psa6g2279 | 1584 | Coils | Coil | 979 | 1009 | - | - | |
| Psa6g2279 | 1584 | Gene3D | - | 614 | 677 | - | - | |
| Psa6g2279 | 1584 | Gene3D | Kinesin motor domain | 65 | 440 | IPR036961 | - |
Showing 1 to 10 of 55 entries
Duplication type information
Functional genes information
Pathway information