Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2267 ATGCACCAACTCATCCAGCTTGTATGTCACAATTGGGCTGATGAAGAATGTGTGAAGTTTTTAAGAAATTGTCACAAAGCTTTGCCAAAACATGGGAAAGTGGTTGTTTTGGATTATATGATTCCAGAGGTTCCAAACCAAAGCAATATCTCTAAGCATGCTTGTGCTATTGACAATCTCATGTTTTTGATACATGGTGGAAAGCAAAGAACTGAAAATGAATTTCAACACTTGTGTATTTGTATATGA 249 0.3574 MHQLIQLVCHNWADEECVKFLRNCHKALPKHGKVVVLDYMIPEVPNQSNISKHACAIDNLMFLIHGGKQRTENEFQHLCICI* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2267 82 PANTHER O-METHYLTRANSFERASE 4 80 IPR016461 GO:0008168
Psa6g2267 82 Pfam O-methyltransferase domain 4 78 IPR001077 GO:0008171
Psa6g2267 82 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 4 80 - -
Psa6g2267 82 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 5 78 IPR029063 -
Psa6g2267 82 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 82 IPR016461 GO:0008168
Psa6g2267 82 Gene3D Vaccinia Virus protein VP39 5 79 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2267 Psa-Chr6 163144172 163144534 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2267 4 78 Monolignol Biosynthesis Gene Families AT5G54160 45.455 3.74e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2267 - - aprc:113869089 145.591