Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2241 ATGGGGAGGTTCAAGCCTCAAGCTTTGTTGCAACAAAGCAAAAGAAAGAAGGGACCTTATCACATGAATCCAATGCCTTTGATGTTTTACTTTTTGATTCTTGTCATATTTGTGTTTTTCCTCTTTGCTACATTCAGATACTGGTCCATTCGACTCGAGAAGAACCAGGCATCAGTCTTTGAGGATGAAAATCTTTCTGTGGAATCCAAGAAATCTGATCTACCTGGATATGCTGTTTTTAGAACATCTAAAGGTTCTATAATAATGGAACTTTACAAGGAAAGTGTTCCTGAAGTTGTTGATGAATTCATTGATTTATGTCAAAAGGGACACTTCAAGGGGATGCTTTTCCACCAAGTAATTAAGCACTATGTTATTCAAGCAAGTCATAACAAAGGGACAGGATCTACAGATGATTGGAACATGAGAGGGAAGAAATATACAAGTATGAAACACGAAGCGTTCATGCTTGGAACTTCCAAGGGCAAATACATCAACAAAGGATTTGATATTTTCATCACGACGGCACCAATACCCGATCTAAACGAGAAACTTATTATTTTCGGTCGGGTCGTAAAGGGAGAGGATGTAGTTCAGGAAATTGAAGAAGTGGATACTGATGAACATTATCAACCAAAACTTTCTATTGGCATAATTGATGTAGATCTTAGACAAATGATGTGA 684 0.3743 MGRFKPQALLQQSKRKKGPYHMNPMPLMFYFLILVIFVFFLFATFRYWSIRLEKNQASVFEDENLSVESKKSDLPGYAVFRTSKGSIIMELYKESVPEVVDEFIDLCQKGHFKGMLFHQVIKHYVIQASHNKGTGSTDDWNMRGKKYTSMKHEAFMLGTSKGKYINKGFDIFITTAPIPDLNEKLIIFGRVVKGEDVVQEIEEVDTDEHYQPKLSIGIIDVDLRQMM* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2241 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 91 106 IPR002130 GO:0000413|GO:0003755
Psa6g2241 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 117 129 IPR002130 GO:0000413|GO:0003755
Psa6g2241 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 170 182 IPR002130 GO:0000413|GO:0003755
Psa6g2241 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 183 198 IPR002130 GO:0000413|GO:0003755
Psa6g2241 227 SUPERFAMILY Cyclophilin-like 74 223 IPR029000 -
Psa6g2241 227 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 78 221 IPR002130 GO:0000413|GO:0003755
Psa6g2241 227 CDD cyclophilin 79 220 - -
Psa6g2241 227 Gene3D - 62 226 IPR029000 -
Psa6g2241 227 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 227 - -
Psa6g2241 227 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 227 - -
Psa6g2241 227 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 74 223 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2241 Psa-Chr6 159766190 159768023 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2241 76 223 U-box Gene Family AT5G67530 28.387 2.80e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2241 - - gmx:100796043 351.288