Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2235 ATGAATGAAATGGTTGCTGTAAACTCTGTGGATCCAGGTAGTAAGAATCGACAATGTATAACTTACATTGAAGCCAAAGGAAGACAGTGTGTGAGATGGGCAAATGAGGGAGATGTATACTGTTGTGTGCACTTATCCTCTCGTTTTTGGGCCGGCTCAGCAAACGCCGAAAACCCGGGTCAAGTTGATACTCCTATGTGTAGTGGTACAACTGTTGTGGGTACTAAATGTAAGCACCGGGCTCTACCTGGGTCGTTATACTGTAAGAAACATCGGCCTAATGCTGAAACAATACATGTCTCGAGTTTACCCCAAAGTACTATGAAGAGGAAACATGAAGAAAATTATACTGGTTCAGAGAACATGTTCTGTAAAGACATAGTATTGGTAAATGGCGAAGGTTCACTGCAAGTGGATCCAGTTCCATATATTGCTGGTAATTCATTACATGGAGTAAACAACTTGTCTGAGAAGCCGGTGCATTCTGAAACGGCTAATCTTGAAAATGATGGAGACTTCTTGTATTTCGTGGCTGATGCTTCTGTTATAGCGTTTCAATATGGAAATCCGGATATATTATGCAAGCCTCTTGTTGAAGCAAAGAAGCACGGAGATGATTTGGTGGAAGCTTATGACAAATTTATCAAAGATTTTTTCCTTAAATCTGAAGGTAGTACACAAAGTTATAACCAACAGAACTTGAAGAACACTGCTATCATTGAAAACAGTGCTGATAAATTATGGTGGTTTCAAGTTTGTACTAAAGTTGCATACTTTCAGGTGGCTCCTTCAAATGACAGTATACGCTCCCACAAAGTTGACACGAGATACCATTTGGACCTTTGCAAAAATGTCTTTGGAAAGGGCATATATCCTGATGTTGATGCAACTAATTTATACTATGGAGACACAAAAGTTGCTGGTTCCAAAATAGTATTCACAAATGGTTCACAAGATCCTCGGCGTCGTGCATCTAAACAAATTTCATCACCCAGCATGCCTTCCAAAGATAGAACTGAGCAGAAATTTGTTGTACCTCTCCCTCAGAATATAAAAGATGGTGTAGAATCAGCTCCTGAAGTATGCGCATAA 1092 0.3984 MNEMVAVNSVDPGSKNRQCITYIEAKGRQCVRWANEGDVYCCVHLSSRFWAGSANAENPGQVDTPMCSGTTVVGTKCKHRALPGSLYCKKHRPNAETIHVSSLPQSTMKRKHEENYTGSENMFCKDIVLVNGEGSLQVDPVPYIAGNSLHGVNNLSEKPVHSETANLENDGDFLYFVADASVIAFQYGNPDILCKPLVEAKKHGDDLVEAYDKFIKDFFLKSEGSTQSYNQQNLKNTAIIENSADKLWWFQVCTKVAYFQVAPSNDSIRSHKVDTRYHLDLCKNVFGKGIYPDVDATNLYYGDTKVAGSKIVFTNGSQDPRRRASKQISSPSMPSKDRTEQKFVVPLPQNIKDGVESAPEVCA* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2235 363 PANTHER OS10G0511600 PROTEIN 164 334 - -
Psa6g2235 363 Pfam Serine carboxypeptidase S28 222 326 IPR008758 GO:0006508|GO:0008236
Psa6g2235 363 Gene3D Serine carboxypeptidase S28, SKS domain 161 272 IPR042269 -
Psa6g2235 363 MobiDBLite consensus disorder prediction 316 343 - -
Psa6g2235 363 MobiDBLite consensus disorder prediction 316 337 - -
Psa6g2235 363 Gene3D alpha/beta hydrolase 236 327 IPR029058 -
Psa6g2235 363 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 164 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2235 Psa-Chr6 157989864 157991938 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2235 1 128 C2H2 Transcription Factor Family AT2G23740 53.125 4.90e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2235 - - mesc:110601726 281.567