Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2212 ATGGCTCACCATTTTTCTAATAAGGCCTTAGGTTCCTTTTTCTTGTTATCTTTTTTTATGTTGTCTTGTTCAACCTTTACCTATGGCCATAGTCATTTTCTTCTTGATCCAGTAGTTATTCCTGGTGATTATCTTTACCCACCAGGAAATGATATTGGAGTTGGTGATCCTCCAGCTCAATCACCCGAGGTGTTAATCGGTGATGCTCCAGCTCAATCGCCCGAGCCGTTAATAGGTGATTCTCCCGCTCCTGCTCCTGCTCCTGCGGCTGAAATCGAATGTGAGAATCGTAACATGAGTTTTCCTAATGAGAGGCTAAAACATTCTTATGTTGCATTTCAAGCATGGAAAAAGGCTATTTATTCTGACCCTTTTAACACAACTGCTAATTGGGTTGGTCATGATGTTTGTTCTTACAATGGTGTGTTTTGTTCTCCTGCTCTTGATGATCCTACATTGAATGTTGTTGCTGGTGTTGATCTTAATCACGCCGATATCGCCGGTCATCTTCCTGAAGAGTTAGGACTATTGAATGATACTGCTCTTTTCCATATTAACTCAAACAGGTTCTGTGGTATTATTCCTGATAGCTTTGAGAATCTCACTATTATGCATGAGTTTGATATCAGTAACAACCGTTTCGTCGGTGAATTTCCTTTGGTGGTCTTAAAATGGAAAAACTTGAAGTTTTTGGATATTAGGTTCAATGATTTTGAAGGAGTTTTACCTCCAGAGCTATTTGAGAAAGAGCTTGATGCAATATTTTTGAACAACAACCGTTTCACCTCGCATATACCAGAAACACTTGGAAATTCAACAGCCTCTGTTGTGAGTTTTGCGAACAATCATTTTACAGGTTGTATTCCAAAATCAATTGGACACATGGTGAACTTGAATGAGATTGTTTTCTTAGGAAATAGTCTTGGTGGTTGTTTTCCACAAGAGATTGGTTTGTTAGGGGATTTAACCGTTTTGGATGCTAGCAAAAATGGGTTTGTTGGGACACTACCAAACTTAGCAGGGTTGAAGAATGTTGAGGTTATTGAGATAGCACATAACAAGCTTAGTGGTTATGTTTCCAACACTATTTGTCAACTACCTTTGTTGACGAACTTTACATTTTCTTATAACTACTTTAATGGAGAAGCACAGGCCTGTGTTCCTTCAAAAGATTCTCTTGTTGTGTTGGATGATGCCAAAAATTGTTTACCGGGAAGGAAGAATCAAAAGACAGCTAAACAATGTTTACCTGTTTTGACAAAACCTGTGGATTGTAGCAAAAATTGTGGTGGAGGAAAAGGGAAGAGTCATGCTCCTTCAACACCTAAACCAACTCCATCAAATCCACCTAAGGTAGAGACACCAAAGGCTCAACCACCACAAATTCCACCAACACTTCCACCGGTTGAAGATATTCCACCTATGCGACCACCGGTTGTAGATATTCCACCAACACTTCCACCGGTTGAGGACATTCCACCTATGCTACCACCTGTTAAAGATATTCCACCAACCGTTTCACCAGTGTCGTTACCACCACCACCACCGGTTGAGCACATTCCACCTATGTTACCACCAGTTGAAGATATTCCACCAACCGTTGCACCAGTGTCATCACCATCACCACCACCACCCGTTGAGCACATTCCACCTATGTTACCACCAGTTGAAGATATTCCACCAACCGTTGCACCAGTGTCATCACCACCACCACCACCACCGGTTGAGCACATTCCACCTATGCTACCACCAGTTGAAGATATTCCACCGACCGTTGCACCAGTGTCATCACCACCACCACCAACGACACAGAATCGAAGGAAACCAAACATCAAACGTATGGAGATGGACGAGGAAACCACAGCAAGGACAGAGAAGCACCGTAAAGAACCATGA 1896 0.4204 MAHHFSNKALGSFFLLSFFMLSCSTFTYGHSHFLLDPVVIPGDYLYPPGNDIGVGDPPAQSPEVLIGDAPAQSPEPLIGDSPAPAPAPAAEIECENRNMSFPNERLKHSYVAFQAWKKAIYSDPFNTTANWVGHDVCSYNGVFCSPALDDPTLNVVAGVDLNHADIAGHLPEELGLLNDTALFHINSNRFCGIIPDSFENLTIMHEFDISNNRFVGEFPLVVLKWKNLKFLDIRFNDFEGVLPPELFEKELDAIFLNNNRFTSHIPETLGNSTASVVSFANNHFTGCIPKSIGHMVNLNEIVFLGNSLGGCFPQEIGLLGDLTVLDASKNGFVGTLPNLAGLKNVEVIEIAHNKLSGYVSNTICQLPLLTNFTFSYNYFNGEAQACVPSKDSLVVLDDAKNCLPGRKNQKTAKQCLPVLTKPVDCSKNCGGGKGKSHAPSTPKPTPSNPPKVETPKAQPPQIPPTLPPVEDIPPMRPPVVDIPPTLPPVEDIPPMLPPVKDIPPTVSPVSLPPPPPVEHIPPMLPPVEDIPPTVAPVSSPSPPPPVEHIPPMLPPVEDIPPTVAPVSSPPPPPPVEHIPPMLPPVEDIPPTVAPVSSPPPPTTQNRRKPNIKRMEMDEETTARTEKHRKEP* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2212 631 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 95 605 - -
Psa6g2212 631 SUPERFAMILY L domain-like 113 403 - -
Psa6g2212 631 MobiDBLite consensus disorder prediction 608 631 - -
Psa6g2212 631 Gene3D Ribonuclease Inhibitor 109 402 IPR032675 -
Psa6g2212 631 MobiDBLite consensus disorder prediction 564 631 - -
Psa6g2212 631 MobiDBLite consensus disorder prediction 564 605 - -
Psa6g2212 631 MobiDBLite consensus disorder prediction 432 461 - -
Psa6g2212 631 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 95 605 - -
Psa6g2212 631 MobiDBLite consensus disorder prediction 442 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2212 Psa-Chr6 156378481 156381560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2212 98 428 Trihelix Transcription Factor Family AT1G49490 68.675 4.68e-170 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2212 - - gsj:114419228 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2212 6 156378481 156381560 Psa6g2212 6 156378481 156381560 ECH