Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2196 ATGAATAAGAAGAATGCAAATTGCTCCCCTGGAAAAACAAAGAAGGGTGACTCAAATAAGGTAGGCAATCAAGATGTTGAGGGGTTTCAGAATTCATCTTTGGTCGATGAAACAAAGAATGTGAACCAAGAGAGTCTCGTCCAACAGGAAATTGTTGAAGCTAGAGACAAATTGGAAAAGCAGAAACAAGACAATCGGAAGAAAGAGTTGGATCTTCTTATGATCAAAAGCATTCAAAATGAAAATCTGTTAGCCAACCTCACTATTGGCGATTCAATTGATTTAACCAAGATGATAGATGAGAAAATTAAGGAGATTGATGCTAAGATCGCTTCACTCGATTGA 345 0.371 MNKKNANCSPGKTKKGDSNKVGNQDVEGFQNSSLVDETKNVNQESLVQQEIVEARDKLEKQKQDNRKKELDLLMIKSIQNENLLANLTIGDSIDLTKMIDEKIKEIDAKIASLD* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2196 114 Coils Coil 44 71 - -
Psa6g2196 114 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2196 Psa-Chr6 154127418 154127999 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2196 16 113 MADS-box Gene Family AT5G26630 26.263 1.35e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2196 - K12882 mtr:MTR_5g047560 71.6329