Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2186 ATGGTAATACCGATTGTGGAGCCTAACACTTGCATTAGGGGTTGCTGCACCAGTTCCTCTATTCCCCTCCATCTCCCTCCTTCCTCTTACTCTCTTCTCTCCCCTATTGCCAGAGGTGCTGAGAGTGTTGTTTATGAAGGCACTTTGAATGGACACAAGGTTGCTATCAAGAAACCAGTTTTGTCTCTTTCTCAACACATCAATGACTTCCATAAACAATTGCAATTGCTATGCAAGCTAGATCACCCGGGAATAGCTACACTAATTGCTGCTCATGCAAAACCACCCAATTATATGTTTTTCTTCAAATTATATCAATCTTCCAATCTTGGCCACAAGTTACATGTCGAAGAATGGGTCCCTACCGTCAATGACGCGCTTATGATAACAATGCAGTTAGCAAAGGCCTTGCAATATCTGCATAACCTCGGGATTCTACATAGAGATGTGAAACCTGCAAATATTCTTCTTGACATAAATCTTTGTCCACGCCTCACCGATTTTGGTTTGGCAGAATACAAGAGTGATATTAAAGAAGTTTCTCTTGAGAATTGGAAATCTTCTGGAAAACCTACAGGTGGTTTTCACAAAAAGAATATGGTTGGAACACTTATTTATATGGCACCTGAAATATTAAGAAAGGAGTTACACACAGAAAAGTCAGATGTATACAGTTTTGGGATATCAATCAATGAACTCCTTACTGGTGTTGTGCCATACACTGATCTTCGTGCAGAAGCACAGGCTCACACAGTACTTGAGATGAACTATACTGAGCATCAACTAACAGCAGCAGTTGTTTCTGATGGATTACGACCGGTCCTTGCTAGCGAAGATTTGGGTATACCATCGAGATTAATATCGATGATACAGAAGTGCTGGGATGCTAATCCTAAAAGCAGACCTTCCTTTGATGATATTGTGAACGAACTTGATTTTATTATGGAACACAGGAAGGTAAAGAATGTGGAAGATATGCATATTAGACCTTGTAACTTGCACATTGACCATCACGTGGACATGACTTATCAAGAGAGTATTAGCTGGTCTACACAAGGTGAACTTTTGGTCGGAAATGCCTCTAGTGCAACTGATCCTTGTTTCAGAACGTGGGAGTCTTATGACGAGCCTTTAGCATACCGTCCAATACTGTCTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAAGCTATGGAGGACACACATTTCATTCTGCCCCATATTTGCAATGAAAAGGATGTCTATGCTTTTGGCATATTTGATGGCCACAGAGGCGCAGCAGCAGCTGAGTTTTCTTCTAGGGCTGTACCAGCAATTTTGCAAAATTTAGGTTTTACAGACAGTCCTGCTAATACATTGGTGGAAGCCTTCCTTAGGACAGATACTGCCTTCAGAAAAGAGCTTGATTCCTATCGCAAATCCAACAGATGTATCCAGAAGGATATGCATCCTGGTTGTACAGCAATTGCTGCTATTGTAAGCGGCAACAGACTATTTGTTGCTAATAGTGGTGATTGCCGGGCAGTCTTATGTCGTGCTGGTAATCCTACTGCTCTAAGCAAGGATCATGTTGCAAGCTGTCTTCAAGAGAGAGAGCGTGTTATTCGTCACGGGGGTCAAGTACATTGGCAAGTTGATACCTGGAGAGTTGGTCTTCCTGCCCTTCAGGTTACTCGTTCTATTGGTGACGATGATCTGAAGCCTGCTGTAACTGCAGAACCTGAGATAACCGAGCACGCCTTATGCGCCGAGGATGAGTTTCTGGTGATGGCTAGCGATGGTTTGTGGGATGTGATGAGCAGTTTGGATGTGATAAATATAATAAAAGACACAGTTAAAGAAGCTGGCATGTGCTCTAAGAGGTTGGCTACTGAGGCTGTGGAACGTGGCAGCAAAGATAACATTACAGTTATTGTCGTTTTTCTTCGACCTGTATCTACAGCAGAGAGAATTTATTAG 1959 0.4257 MVIPIVEPNTCIRGCCTSSSIPLHLPPSSYSLLSPIARGAESVVYEGTLNGHKVAIKKPVLSLSQHINDFHKQLQLLCKLDHPGIATLIAAHAKPPNYMFFFKLYQSSNLGHKLHVEEWVPTVNDALMITMQLAKALQYLHNLGILHRDVKPANILLDINLCPRLTDFGLAEYKSDIKEVSLENWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEHQLTAAVVSDGLRPVLASEDLGIPSRLISMIQKCWDANPKSRPSFDDIVNELDFIMEHRKVKNVEDMHIRPCNLHIDHHVDMTYQESISWSTQGELLVGNASSATDPCFRTWESYDEPLAYRPILSWGSYATCGRREAMEDTHFILPHICNEKDVYAFGIFDGHRGAAAAEFSSRAVPAILQNLGFTDSPANTLVEAFLRTDTAFRKELDSYRKSNRCIQKDMHPGCTAIAAIVSGNRLFVANSGDCRAVLCRAGNPTALSKDHVASCLQERERVIRHGGQVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITEHALCAEDEFLVMASDGLWDVMSSLDVINIIKDTVKEAGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2186 652 CDD PP2Cc 387 642 IPR001932 -
Psa6g2186 652 SUPERFAMILY Protein kinase-like (PK-like) 17 320 IPR011009 -
Psa6g2186 652 PANTHER - 1 652 - -
Psa6g2186 652 ProSiteProfiles Protein kinase domain profile. 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2186 652 SMART PP2C_4 375 640 IPR001932 -
Psa6g2186 652 Pfam Protein phosphatase 2C 390 635 IPR001932 -
Psa6g2186 652 SMART PP2C_SIG_2 400 642 IPR001932 -
Psa6g2186 652 Pfam Protein kinase domain 31 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2186 652 PANTHER PROTEIN PHOSPHATASE 2C 1 652 IPR015655 GO:0004722|GO:0006470
Psa6g2186 652 SMART serkin_6 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2186 652 SUPERFAMILY PP2C-like 378 644 IPR036457 -
Psa6g2186 652 Gene3D - 378 647 IPR036457 -
Psa6g2186 652 Gene3D Transferase(Phosphotransferase) domain 1 19 340 - -
Psa6g2186 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Psa6g2186 652 ProSiteProfiles PPM-type phosphatase domain profile. 385 642 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2186 Psa-Chr6 153163234 153168037 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2186 99 652 PP2C-type Phosphatase Gene Family AT2G40860 63.993 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Psa6g2186 Pkinase 2.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2186 - - gmx:100785390 1082.78