Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2181 ATGGCCTTTTCAGGTAAGCATGGCTGGGAAGACACGAAAGGCTTCACCCTGCAAGTCCTAACAGGAAGGTGGTTTATGGTGTTTTCATCATTTATGATCATGTCTGTGTCGGGAGCAAGCTACATGTTTGGTCTTTACTCAAGAGAAATAAAGTCTGTTTTGGGATATGACCAATCCACTCTTACTCTTTTAAGCTTCTTCAAGGACTTGGGCTCTAACATAGGCATTCTTTCTGGCCTTCTCAATGAAGTCACACCCCCTTGGGTTGTCTTATCAATTGGTGGTGTTCTAAACTTCTTTGGCTATTTCATGATTTGGCTTGCTGTCACAAGAAAAATCCCCAAACCAGCAGTATGGAATATGTGCTTATACATATTCATTGGAGCCAATTCTCATTGTTCAACCAACACTGGTGCTTTAGTCACAAGTGTAAAGAACTTCCCTGGTAGCAGAGGTGTTGTCATAGGCCTTTTGAGTGGCTATCTTGGTTTGAGTGGAGCTATCATCACTCAGCTATACTATGCCTTCTATGGAGATGACTCTAAATCTTTAATTTTGCTTATGGCTTGGCTACCAACTGCTGTAACTTTTGTTTTTATGCCAGTTATTAAACACCACAAAAGAGTTGAACAACCAAATGATTCCAAGGCTTTTTATAATTTCCTTTACATGACTTTGATCCTTGCAGGATTCCTCATGATAATGATCATAGTGCAAAAGTGTTTCAACTTTACTAAGAGTGAGTACTATGTCACTACCACCGTCATGCTTCTCTTGCTTATCCTTCCTCTTGTTGTTGTTATCATGGAAGAAAAAAGGATTTGGAAGAGCAAAAAAGAGAACATCAATACTCCTAAGCCTTTGAATATAATCACGCAGACTGATAATGCTAGCGGAGAGAGTACTCAAAATCAAAACATTCGTAGAGGTGAAGATCATACAATACTTGAAGCCATTTTCAGCCTTGACATGATGACTCTTTTTGTAGCCACAATTTGTGGACTTGGTGGAACTCTTACTGTGGTAAATAACTTGAGTCAGATTGGATTATCTTTAGGTTATCCAGCACATAGTATAACCACATTTGTTTCACTAATGGCTATTTGGATCTATCTAGCTTCCATTATTATTGGTTTCTGCTTTGGAGCAAACTGGCCAGTACTATTTTCAATCATATCTGAGCTATTTGGTCTTAAATATTACTCAACATTGTACAATGTTGGGTCAATAGCAAGTCCAATAGGGTCATACTTGTTAAGTGTGAGGGTTGCTGGTTATCTGTATGACAAGGAAGCCACAAAGCAAATGGCAGCATTAGGACTAAAGAGGAAGCAAGGGGAGGAGTTGAATTGCAATGGAAGTGAGTGCTACAAATTGGCTTTCATTATAATCACTGCTGTTAGCCTCTTTGGGGCACTTGTGTCTCTAACTTTAGTTTTAAGGACTAGAGAGTTCTATAAAGGTGACATATACAAGAAGTTCAGAGAGGAAGCTAGAAATAATGAATTGGTTGTGACTCAGAACAAGGTTGGACCTGCCTCAAATGATGGATAG 1554 0.3912 MAFSGKHGWEDTKGFTLQVLTGRWFMVFSSFMIMSVSGASYMFGLYSREIKSVLGYDQSTLTLLSFFKDLGSNIGILSGLLNEVTPPWVVLSIGGVLNFFGYFMIWLAVTRKIPKPAVWNMCLYIFIGANSHCSTNTGALVTSVKNFPGSRGVVIGLLSGYLGLSGAIITQLYYAFYGDDSKSLILLMAWLPTAVTFVFMPVIKHHKRVEQPNDSKAFYNFLYMTLILAGFLMIMIIVQKCFNFTKSEYYVTTTVMLLLLILPLVVVIMEEKRIWKSKKENINTPKPLNIITQTDNASGESTQNQNIRRGEDHTILEAIFSLDMMTLFVATICGLGGTLTVVNNLSQIGLSLGYPAHSITTFVSLMAIWIYLASIIIGFCFGANWPVLFSIISELFGLKYYSTLYNVGSIASPIGSYLLSVRVAGYLYDKEATKQMAALGLKRKQGEELNCNGSECYKLAFIIITAVSLFGALVSLTLVLRTREFYKGDIYKKFREEARNNELVVTQNKVGPASNDG* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2181 517 SUPERFAMILY MFS general substrate transporter 24 488 IPR036259 -
Psa6g2181 517 PANTHER MFS TRANSPORTER 7 376 - -
Psa6g2181 517 PANTHER MFS TRANSPORTER 370 517 - -
Psa6g2181 517 Pfam Nodulin-like 23 268 IPR010658 -
Psa6g2181 517 Gene3D MFS general substrate transporter like domains 320 487 IPR036259 -
Psa6g2181 517 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 370 517 - -
Psa6g2181 517 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2181 Psa-Chr6 152724461 152726158 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2181 13 497 Nodulin-like Gene Family AT2G39210 55.755 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2181 - - gmx:100789645 728.783