Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2155 ATGATATTTACTCAGGTATGTGACTTTGGCCTTTCACGTACAAAGGCAAATACATATCTTTCATCTAAAACAGCTGCTGGAACTCCTGAATGGATGGCACCAGAAGTCATCCGAGGTGAACAATCAAATGAAAAATGTGATGTATTCAGTTTTGGTGTAATCTTGTGGGAACTGGTGACCCTTCAACAACCATGGAGGCAGTTAAATCCTTCACAGGTTGTTGCAGCTGTTGGTTTTATGGACAAAAGGCTAGAAATTCCGAGGCATGTGAATCCTCAAGTGGCTGCCTTGATTGAGCTCTGTTGGTCTGCGGATCCAAGGAGGCGGCCTTCTTTCTCCTACATTATGAAATGTTTGCTGCAAATAATTGCCGACGCTAAAGTGTGA 387 0.4315 MIFTQVCDFGLSRTKANTYLSSKTAAGTPEWMAPEVIRGEQSNEKCDVFSFGVILWELVTLQQPWRQLNPSQVVAAVGFMDKRLEIPRHVNPQVAALIELCWSADPRRRPSFSYIMKCLLQIIADAKV* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2155 128 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 4 126 - -
Psa6g2155 128 ProSiteProfiles Protein kinase domain profile. 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g2155 128 Gene3D Transferase(Phosphotransferase) domain 1 3 127 - -
Psa6g2155 128 Pfam Protein tyrosine and serine/threonine kinase 4 119 IPR001245 GO:0004672|GO:0006468
Psa6g2155 128 SMART tyrkin_6 1 119 IPR020635 GO:0004713|GO:0006468
Psa6g2155 128 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 4 126 - -
Psa6g2155 128 SUPERFAMILY Protein kinase-like (PK-like) 5 119 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2155 Psa-Chr6 148605740 148606589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2155 5 126 MAP Kinase Kinase Kinase AT5G03730 72.131 3.42e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Psa6g2155 PK_Tyr_Ser-Thr 5.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2155 K14510 - gsj:114370482 236.113