Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2154 ATGTACGGCGGCGGTCACCGTGAATCCGAATCTGAGAGCACCAGGATGCACAACGATGAAGATGAAGAAGACGAAGAAGGTTCCTTCAAGAGCTGGGCAAAGCAAACACAAGAAAGTTATCAGCTACAGCTCGCACTCGCGCTTCGCATTTCATCTCACTCATCTTCTCCCTCTCAATCCAATTGCTTGTCGGACTCCGAAACCACCTCTTCCCCTTCCGATTCTCCCCAATCACTTTCACACCGTTTTTGGGTAAATGGTTGTTTGCAATATTCTGACAAAATTCTAGATGGCTTTTACCTAATTCACGGAATGGATGCATATACATGGACTATAAGCACCGATATGCAGAATGTTGGTATGATTCCGTCAATTGAATCACTCATGTCTGTTAAACCATGCGATAATTCGTCAATTGTAGTGGTTGCTATTGACAAATCTAGAGACCCTGCCTTGAGAGAACTTCAAACTGGGGTATTGAGTCTTTCGAGTAACTGGATTACGATCAAAGATGCAACTGATCAGCTTGCAAATCTTGTTTATAATAGAATGGGAGGAGGATCCTCCGATGAAGAAAATTTAGGTACACGCTGGAAGGAATGCTCTGAAATTCTTAAAAGCTGTCTGCAGTCTGTCATTCTTCCTATTGGAAGCTTACCTGTTGGCCTTTGTGTCCATCGAGCATTGCTGTTTAAAGTGTTAGCGGATTTAATCAACCTACCGTGTCGAATTGCTAAGGGCTGCAAGTATTGTAGAAAGGACACAGGTGCTTCTTGTATAGTGCAATTTGGTTCTGACAGGGAGTATATGATTGATTTAGTAGGAAGGCCTGGGGAAACATACCAACCTGATTCTTCAGTGAATTCTGCATCTTCGATGTTGATCCCTTCGCCATTATGTCATCCAAGGTTCAAGCCAGTTGAAACAGCTGATTATACAAAAGCAATGGCCCAGTTGTATTTCCTGGACAATCAAGCACTGCATCTTGCATTTGATACCACATCAGGTTGTTTCTTTTGCCTTTCTGGGTGCTTTTTAAAAAATAAAGTAATTGTTGGGTGGAGTTAG 1068 0.4251 MYGGGHRESESESTRMHNDEDEEDEEGSFKSWAKQTQESYQLQLALALRISSHSSSPSQSNCLSDSETTSSPSDSPQSLSHRFWVNGCLQYSDKILDGFYLIHGMDAYTWTISTDMQNVGMIPSIESLMSVKPCDNSSIVVVAIDKSRDPALRELQTGVLSLSSNWITIKDATDQLANLVYNRMGGGSSDEENLGTRWKECSEILKSCLQSVILPIGSLPVGLCVHRALLFKVLADLINLPCRIAKGCKYCRKDTGASCIVQFGSDREYMIDLVGRPGETYQPDSSVNSASSMLIPSPLCHPRFKPVETADYTKAMAQLYFLDNQALHLAFDTTSGCFFCLSGCFLKNKVIVGWS* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2154 355 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 21 343 - -
Psa6g2154 355 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 21 343 - -
Psa6g2154 355 Pfam Ethylene-responsive protein kinase Le-CTR1 77 279 - -
Psa6g2154 355 MobiDBLite consensus disorder prediction 57 76 - -
Psa6g2154 355 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2154 Psa-Chr6 148587509 148592178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2154 32 335 MAP Kinase Kinase Kinase AT5G03730 53.722 2.84e-93 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2154 K14510 - gmx:100807496 526.939