Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2148 ATGAAGAACTCTGCTTCAGAGAATGTGTTTTTCATTGAGAGCGATGAAGAAGGTGAAGACAGGGAGTTCGGAAGAGATGAAATGGGTGGAAATGAATCCGATTACTCCAATGACTCAAATGACAATCAAGAACAGAGAAAGCCAAGTTCTTACAGCATGGCCTGGCCTCAAAGTTACAGGCAATCCATTGATCTGTATGGTAGTGTGCCATCGCCGAATATAGGGTTTCTCGGCACTTCATCGCTCACAAGATTAGGCAGTTCTTTTCTTGGTTCATCCTTGTCAAGGAGGCACACTGCTGAATTTATACCTCCACTGAAAAAGCCTCTGGTAGAACCAATAGATGAACAACAGCGAAAGAGCTCGAAAACATTGCTTCCTCCTCACCCATCTAGGAAGTCTTCCATGCGGAGGGATCCTTCAAAGACTTCTCATGAAGTTCATATTCCTAGCCAATGCTCTTTTGGACAAGCTGTGCTTAATGGCATAAATGCCCTCTGTGGTGTTGGACTTCTTTCAGTCCCTTATGCTCTTGAACAAGGTGGATGGTCTGCACTTTCAATCTTGCTGATATTTTCAATATTCTCCTTCTACACCGGCTTGCTGTTGCGCTATTGCTTGGATAGCGAACCTGGACTAGAGACTTACCCTGACATTGGCCAAGCCGCTTTTGGTACCACCGGACGTGTTATCATTTCGATAATATTATACATGGAATTATATGCGTGTTGCATTGAATACATAATTCTAGAAAGTGACAACTTATCTTCGTTATTTCCAAATGCACACTTGAGTTTGGGTGGATTTGAATTGAATGCACACATTCTATTTGCAATAGCTACCACATTGGCTATTCTTCCTACCGTTTGGCTCCGGGACCTTCGCATTCTAAGTTACGTATCAGCTTGTGGAGTTATTGCGACGATTGTTGTGGTTCTATGCTTATTATGGGTTGGCGTGGTAGACGATCTTCCTATGCATACAAAAGGAACAACAACATTTAAACTTTCAACATTTCCTGTTGCTGTTGGTCTCTATGGTTACTGCTTCGCCGGACATGCTGTCTTCCCCAACATATATACAGCTATGGCAAATCGAAATCAATTCCCCGCAGTTCTCTTGATATGTTTTGCTATTTGTACGACAATGTATTTCTCAGTAGCTATTATGGGATACTCAATGTTTGGAGAAACTACACTGTCTCAGTATACTCTTAACATGCCCCGGGAATTTGTTGCCACCAAAATTGCTCTATGGACTACGGTGGTTAATCCATTTACCAAATATGCTTTGAGTCTAACTCCAGTAGCAATGTCTGTGGAGGAATTGATTCCACCAAATAATCCCCACTTTCAGTTATACTCCATCCTCATCAGAACAGCGCTAGTGATTTCTACGCTGCTCGTTGGTCTTTCAGTTCCCTTTTTCGGTTTGGTCATGTCTTTAATTGGATCTTTGCTCACAATGTTTGTTTCTCTTATTCTACCATCTGCTTGTTTCCTAAGCATCAAGCGTGGCCGAATCAAGCGCGCTCAGGTAGCACTTTGTGTTGCAGTGATTATAGTAGGCCTTGTATCATCTGCTTTTGGATCATACTCAGCAATCTCGGAGATTCTTAAAGAATTGTTTGCATGA 1635 0.422 MKNSASENVFFIESDEEGEDREFGRDEMGGNESDYSNDSNDNQEQRKPSSYSMAWPQSYRQSIDLYGSVPSPNIGFLGTSSLTRLGSSFLGSSLSRRHTAEFIPPLKKPLVEPIDEQQRKSSKTLLPPHPSRKSSMRRDPSKTSHEVHIPSQCSFGQAVLNGINALCGVGLLSVPYALEQGGWSALSILLIFSIFSFYTGLLLRYCLDSEPGLETYPDIGQAAFGTTGRVIISIILYMELYACCIEYIILESDNLSSLFPNAHLSLGGFELNAHILFAIATTLAILPTVWLRDLRILSYVSACGVIATIVVVLCLLWVGVVDDLPMHTKGTTTFKLSTFPVAVGLYGYCFAGHAVFPNIYTAMANRNQFPAVLLICFAICTTMYFSVAIMGYSMFGETTLSQYTLNMPREFVATKIALWTTVVNPFTKYALSLTPVAMSVEELIPPNNPHFQLYSILIRTALVISTLLVGLSVPFFGLVMSLIGSLLTMFVSLILPSACFLSIKRGRIKRAQVALCVAVIIVGLVSSAFGSYSAISEILKELFA* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2148 544 Pfam Transmembrane amino acid transporter protein 153 535 IPR013057 -
Psa6g2148 544 MobiDBLite consensus disorder prediction 1 52 - -
Psa6g2148 544 MobiDBLite consensus disorder prediction 33 52 - -
Psa6g2148 544 MobiDBLite consensus disorder prediction 109 143 - -
Psa6g2148 544 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 23 541 - -
Psa6g2148 544 PANTHER OS05G0424000 PROTEIN-RELATED 23 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2148 Psa-Chr6 148257021 148261047 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2148 1 477 Amino Acid or Auxin Permease AAAP Family AT2G39130 64.742 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2148 K15015 - gmx:100781123 792.727