Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2138 ATGGACGTTGTAGATTGGGAATCTATCCTCGATGATTTACCAGAGCTTGAAGTCGCCGATTTTTTTCAAGATGGAATTATTCCTCCTGATTCCTTCGCAGACCATCCCTCGCCAAATTCATCTATGTCGCAGCTTGAGAACTTGCTCATGACAGATTTCGACAACGGAGAAGGAATCGCGTCGCCGGAATCCGACTATGATAAGCTTCTCGAGGAGATTCTCGTTCAGCCGCTTCCTCAATCGGAGGAAAGTTTGACTCCTTCTGATAAAGACAGAGTTGATCCGTTAACTCCCGAAGAGGTTCCTCATGAACCCGTCTCAAAGAAGCAAATACGGCAGATGAGGAACAGGGATGCTGCTGTGAAATCAAGAGAGAGGAAGAAGATGTATGTGAAAAACCTTGAGAGCAAGAGTAGGTTTTTTGAAGGGGAATGCAGAAGACTGGAGCATTTGCTCCAGTGCTGTTATGCTGAGAACCATGCTTTGCGGCTATGTTTGCAATCGCGTGGTGCATTTGGTGCTTCCATGACCATGCAGGAGTCTGCTGTGCTCTTGTTGGAATCCCTGCTGCTGGGTTCCCTGCTATGGTTCATGGGCATCATGTGCCAACTCAGTCTACCCCTTTTACTGTGGCTAACAGTGTTACCTCCAAGAGAAAACGTGAAACACAAAGGTCTAAGAAGCGTGGCTCTAAAAAGGCCAAATAGTAATATAAAGTATTTCCTGACTCAGTCTTTTGTAAAGAGTAGAAGATGCCAAGCTTCAAGAACGAAGATGAAAGATGATAAAGATGATTTTATCGTGTTCTAA 810 0.4494 MDVVDWESILDDLPELEVADFFQDGIIPPDSFADHPSPNSSMSQLENLLMTDFDNGEGIASPESDYDKLLEEILVQPLPQSEESLTPSDKDRVDPLTPEEVPHEPVSKKQIRQMRNRDAAVKSRERKKMYVKNLESKSRFFEGECRRLEHLLQCCYAENHALRLCLQSRGAFGASMTMQESAVLLLESLLLGSLLWFMGIMCQLSLPLLLWLTVLPPRENVKHKGLRSVALKRPNSNIKYFLTQSFVKSRRCQASRTKMKDDKDDFIVF* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2138 269 MobiDBLite consensus disorder prediction 85 108 - -
Psa6g2138 269 Gene3D - 107 168 - -
Psa6g2138 269 SMART brlzneu 104 168 IPR004827 GO:0003700|GO:0006355
Psa6g2138 269 Pfam bZIP transcription factor 107 150 IPR004827 GO:0003700|GO:0006355
Psa6g2138 269 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 112 126 IPR004827 GO:0003700|GO:0006355
Psa6g2138 269 SUPERFAMILY Leucine zipper domain 108 164 IPR046347 GO:0003700|GO:0006355
Psa6g2138 269 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 106 149 IPR004827 GO:0003700|GO:0006355
Psa6g2138 269 MobiDBLite consensus disorder prediction 77 108 - -
Psa6g2138 269 CDD bZIP_HY5-like 109 160 - -
Psa6g2138 269 PANTHER BZIP TRANSCRIPTION FACTOR 60 1 262 - -
Psa6g2138 269 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 1 262 - -
Psa6g2138 269 Coils Coil 131 151 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2138 121 183 bZIP Transcription Factor Family AT1G42990 54.688 9.54e-14 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa6g2138 bZIP_1 4.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2138 - - pvu:PHAVU_007G247600g 285.419