Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2129 ATGGAAGCAGAAACGGGTGAAGAACATGTGGTGAGGCGAGTTATTGATGGAAGGGGGAGGAAAAGTTTTGGAGAGTTGATAGAAAACTCAGCAAGCTTCCATGAGAGAAGTGACGAAGAGGAGACGAAATGGGAGGCGTTATGGAGGCTTCCAACATATGATAGGATGAGGAAAGTGATTTTGAAGCAAGTTCTTGATAATGGAAAAGTTAACTATGAAGAAGTTGATATCAACAAGCTTGGAGTAGAGGAAAAGAAGCATATTTTGGAGAGCATAATAAAGACTGCGGAAGTAGATAATGAGAAATTTCTTCAAAAAATGAGAGACAGAATTGATAGGGTAGGAATTGAGATTCCTAAGATTGAAGTCCGGTTTGAGAATTTAACAGTTGAAGGGGATGCATATGATGGAACCAGGGCTTTACCAACACTAATCAATGCTACCCTCAATATAATTGAGGGACTTTTGGGTTATATCAAGATTTTGGCATTTAAGAAAAGGGTTATCAAGATTCTCAAAGATGTTAGTGGAATTGTAAAACCATCAAGAATGACTTTATTACTGGGACCTCCAGGTTCAGGAAAAACTACACTGCTTCAGGCACTTGCTGGGAAAATGGACAAGGATCTAAGGGCATCAGGAAGAGTGACTTACAATGGTCATGAATTGTCAGAATTTGTTCCTCAAAGAACATGTGCTTATATTAGTCAGGATGATCTTCACCATGGAGAAATGACAGTGAGAGAGACGCTGGACTTGTCCGGACGCTGCTTAGGTGTTGGAACAAGGTATGATATGTTGATAGAATTGTCAAGACGAGAAAAAGCATCAGGCGTCAAACCAGATCCTGAAATAGATGCTTTCATGAAAGCCACATCAATGGAAGGTCAAGAAACAAGTCTTGTTACAGATTATATTCTCAAGATTCTTGGGTTGGAAACGTGTGCTGATATTTTGGTGGGAGATGAGATGAGAAGGGGCATATCAGGTGGACAAAAGAAGCGTTTAACCACTGGTGAGATGTTGGTAGGACCTGCAAAAGCCCTCTTTATGGATGGAATTTCAACTGGTTTGGATAGTTCTACAACCTTCCAAATTGTCAGGTTTATGAGGCAGATGGTTCATATCATGGATGTCGCTATGATAATCTCACTTCTTCAACCTGCACCAGAAACGTACAACCTTTTTGATGACATAGTATTACTTTCAGAAGGTGAGATTGTTTATCAAGGTCCGCGTGAGAGTGTTCTAGACTTTTTTCAAAGTGTCGGCTTCAAGTGCCCAGAAAGGAAAGGAATTGCAGACTTTTTACAAGAGGTAACTTCTAGAAAGGATCAAGAGCAGTACTGGTTCAGAAGGGACATACCTTATCAATACGCTAGTGTGCCTGATTTTGTAACGCACTTCAACAATTACTGCATCGGTAAACAACTTCACGAAGAGATTCAAGTTCCATTTGATTCTAGTAAAACTCATCCTGCTGCATTAGTGAAGGAAAAGTATGGAATCCCCAAATGGGAACTCTTCAAGGCATGTTTTTCAAGAGAATGGCTATTCATGAAGCGTAGCTACTTTGTATATATATTTAAGACTTTTCAGATTACTATCATGTCTATAATTACCATGACAGTATTTTTTAGAACAAAAATGGAGCATGGTCAACTTGAGGATGGGGGGAAATATTATGGTGCACTGTTTTTCAGCCTTATCAATGTCATGTTCAATGGAGCGGCAGAACTTGCAATGACTGTTAACAGACTTCCTGTTTTCTTCAAGCAGAGAGATTTCTTATTTTATCCAGCATGGGCTTTTGCATTGCCCATTTGGGTCCTCAGAGTTCCTCTCTCTATAGTGGAATCAGTATTATGGATCATCCTCACTTATTATACTATTGGTTTTGCTCCAGCACCTAGTAGGTTTTTCCGTCAACTACTGGCATTCTTCTGTGTGAATCAAATGGCTCTATCCCTTTTCCGGTTCATTGCTGCAATTGGAAGGACAAGAGTTGTGGCTAACACATTTGCTTCCATAACCATTTTAGCTGTTTTCGTCTTAAGTGGATTTACTGTTTCAAGAGATGATATTGGGCCATGGATGATATGGTGCTATTATGCTTCACCTATGATGTATGGAATGACTGCAATAAGCATCAATGAATTTCTAGACAAAAGATGGAATACTCCTAATATGGACCCTAGAATCGATGAACCCACAGTTGGAAAAGCATTACTCAAGGCCAGAGGCATATTTACAGAAGACTATTGGTATTGGATATCTATCGGTGCTCTTATAGGATTTTCTCTACTGTTCAATGTCTGTTTCATTCTTGCTCTAACTTACTTGGACCCATTCAGAAGCTCAAAATCTATCATGGTGGAACAGGAAGACAATAGGGAAACCACAACGACATCCTCCTCAGTGGAAAAAACAACAGGAGAAATTACAGAAAATTCAGCTTCAAATGTTGAATCATTTGAAGGTGTTGACATGGAAGTAAGAAACAACACACGTAGTTCTATTCCTAAAGCTGCAAAGAATGCAAAATTCAGGAAGGGAATGGTGTTACCCTTTCAGCCTCTGTCACTTGTTTTTGAAAATGTGAATTATCACATTGATATGCCAAATGAAATGAAGAAGCAAGGAATTGAAGAGAATAAACTCCAACTACTAAGAAACATAAGTGGTGCTTTTAGGCCTGGAATTTTAACAGCATTAGTTGGTGTAAGTGGTGCTGGAAAAACCACTTTGATGGATGTGCTTGCAGGAAGGAAAACTAGTGGTCACATTGAAGGAAGTATCAGCATATCGGGTTATCACAAGAACCAAGCAACTTTTGCTCGGATTAGTGGTTATTGTGAACAAAACGATATCCACTCTCCCAATATTACAGTTTATGAGTCGCTTCTGTTTTCTTCTTGGTTGCGGCTCAGTAAAGAGGTTGATATAGAAACACGAAAGATGTTTATTGAGGAAGTTATAGAGCTAGTTGAGTTACATCTAGTGAGAAATTTCTTAGTCGGCCTTCCTGGAATAGATGGCTTATCAACTGAGCAGAGAAAGAGGCTTACCATTGCTGTAGAATTGGTTGCGAATCCTTCCATTATCTTTATGGATGAACCAACAACTGGTCTTGATGCTAGAGCTGCAGCAGTTGTTATGCGTACAGTTAGAAACACAGTGGATACAGGGAGAACTGTTGTGTGCACAATTCATCAACCAAGCATTGATATATTTGAACATTTTGATGAGTTGCTTTTGTTGAAGACCGGTGGACAAGTGATATATGGTGGCCCTCTAGGTCGAAATTCTGAGAAACTTATCGAGTACTTTGAGGCTATTACAGGAATTCCAAAGATTGAAGATGGATATAATCCAGCTACATGGATGCTGGAGATCAGTTCTCCTGTGGTTGAGTCTCAGCTTGATATAGATTTTGCGGAATTATACAATAACTCAAGCCTTTACGAAAAGAGCCAAGAACTTATCAAGGAACTATCCACACCAGCACCTGGAACAAAGGACCTTTACTTTCCATCTAAATACTCGCAACCATTTGTTACTCAATGCAATGCTTGCTTCTGGAAACAGTACTGTTCCTATTGGAGGAATCCACAGTATAATGCCATCAGATTCTTCATCACAATAGTTATTGGTGTTTTGTTTGGACTTATTTATTGGAAAAAAGGAGATAAGATACAAAAGGAACAAGACCTTTTAAATCTTGTTGGAGCTATGTATTCCTCTGTTATTTTCCTTGGTGCATCCAACACTAGCAGTGTGCAACCTATTATTGCAATAGAAAGAACAGTTCTATACCGTGAAAGAGCAGCTGGATTGTACTCAGAGCTTCCCTATGCAATTGGTCAGATTGCGATTGAAGTCATTTATGTTGCAATCCAAAGTCTGATATACTCCACTATCCTCTACTGGATGATTGGGTTCCAACCACAAGTCGAAAACTTCATTTGGTTTTACTTCTTCATATTCATGTCCTTTATCTACTTCACACTATATGGAATGATGACGGTGGCCCTGACACCAAACCACCAGATTGCTGCCATCGTGATGTCTTTCTTCATCAGTTTTTGGAACCTATTCTCTGGTTTTCTTATTCCAAGAACGCAAATTCCAATATGGTGGAGGTGGTATTATTGGGCATCTCCTGTGGCATGGACTATATATGGACTGGTGACATCCCAGGTGGGTGATATGAATAGTCCAATAGAGGTTCCTGGATATAGGCTCATGACAGTAAAAGATTACCTTGAGAGACGATTGGGCTTTGAACATGACTTCCTTGGATTTGTTGTTTTGGCTCATATTGCTTTTTGCCTTCTCTTCCTGTTTGTATTCGCCTATGGCATCAAGTTTTTAAACTTCCAGAAAAGATAA 4392 0.3941 MEAETGEEHVVRRVIDGRGRKSFGELIENSASFHERSDEEETKWEALWRLPTYDRMRKVILKQVLDNGKVNYEEVDINKLGVEEKKHILESIIKTAEVDNEKFLQKMRDRIDRVGIEIPKIEVRFENLTVEGDAYDGTRALPTLINATLNIIEGLLGYIKILAFKKRVIKILKDVSGIVKPSRMTLLLGPPGSGKTTLLQALAGKMDKDLRASGRVTYNGHELSEFVPQRTCAYISQDDLHHGEMTVRETLDLSGRCLGVGTRYDMLIELSRREKASGVKPDPEIDAFMKATSMEGQETSLVTDYILKILGLETCADILVGDEMRRGISGGQKKRLTTGEMLVGPAKALFMDGISTGLDSSTTFQIVRFMRQMVHIMDVAMIISLLQPAPETYNLFDDIVLLSEGEIVYQGPRESVLDFFQSVGFKCPERKGIADFLQEVTSRKDQEQYWFRRDIPYQYASVPDFVTHFNNYCIGKQLHEEIQVPFDSSKTHPAALVKEKYGIPKWELFKACFSREWLFMKRSYFVYIFKTFQITIMSIITMTVFFRTKMEHGQLEDGGKYYGALFFSLINVMFNGAAELAMTVNRLPVFFKQRDFLFYPAWAFALPIWVLRVPLSIVESVLWIILTYYTIGFAPAPSRFFRQLLAFFCVNQMALSLFRFIAAIGRTRVVANTFASITILAVFVLSGFTVSRDDIGPWMIWCYYASPMMYGMTAISINEFLDKRWNTPNMDPRIDEPTVGKALLKARGIFTEDYWYWISIGALIGFSLLFNVCFILALTYLDPFRSSKSIMVEQEDNRETTTTSSSVEKTTGEITENSASNVESFEGVDMEVRNNTRSSIPKAAKNAKFRKGMVLPFQPLSLVFENVNYHIDMPNEMKKQGIEENKLQLLRNISGAFRPGILTALVGVSGAGKTTLMDVLAGRKTSGHIEGSISISGYHKNQATFARISGYCEQNDIHSPNITVYESLLFSSWLRLSKEVDIETRKMFIEEVIELVELHLVRNFLVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEHFDELLLLKTGGQVIYGGPLGRNSEKLIEYFEAITGIPKIEDGYNPATWMLEISSPVVESQLDIDFAELYNNSSLYEKSQELIKELSTPAPGTKDLYFPSKYSQPFVTQCNACFWKQYCSYWRNPQYNAIRFFITIVIGVLFGLIYWKKGDKIQKEQDLLNLVGAMYSSVIFLGASNTSSVQPIIAIERTVLYRERAAGLYSELPYAIGQIAIEVIYVAIQSLIYSTILYWMIGFQPQVENFIWFYFFIFMSFIYFTLYGMMTVALTPNHQIAAIVMSFFISFWNLFSGFLIPRTQIPIWWRWYYWASPVAWTIYGLVTSQVGDMNSPIEVPGYRLMTVKDYLERRLGFEHDFLGFVVLAHIAFCLLFLFVFAYGIKFLNFQKR* 1464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2129 1463 Pfam Plant PDR ABC transporter associated 725 790 IPR013581 -
Psa6g2129 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 885 1098 IPR027417 -
Psa6g2129 1463 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 156 429 IPR003439 GO:0005524
Psa6g2129 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 428 IPR027417 -
Psa6g2129 1463 Pfam ABC-2 type transporter 387 440 IPR043926 GO:0140359
Psa6g2129 1463 Pfam ABC-2 type transporter 1071 1142 IPR043926 GO:0140359
Psa6g2129 1463 MobiDBLite consensus disorder prediction 796 820 - -
Psa6g2129 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 209 IPR027417 -
Psa6g2129 1463 MobiDBLite consensus disorder prediction 793 820 - -
Psa6g2129 1463 Pfam ABC-transporter N-terminal 96 147 IPR029481 -
Psa6g2129 1463 Gene3D - 862 1111 IPR027417 -
Psa6g2129 1463 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 871 1114 IPR003439 GO:0005524
Psa6g2129 1463 SMART AAA_5 899 1091 IPR003593 -
Psa6g2129 1463 SMART AAA_5 181 406 IPR003593 -
Psa6g2129 1463 Pfam ABC-2 type transporter 508 720 IPR013525 GO:0016020|GO:0140359
Psa6g2129 1463 Pfam ABC-2 type transporter 1187 1399 IPR013525 GO:0016020|GO:0140359
Psa6g2129 1463 Pfam ABC transporter 172 352 IPR003439 GO:0005524
Psa6g2129 1463 Pfam ABC transporter 890 1041 IPR003439 GO:0005524
Psa6g2129 1463 Gene3D - 162 458 IPR027417 -
Psa6g2129 1463 CDD ABCG_PDR_domain2 859 1097 IPR034003 -
Psa6g2129 1463 PANTHER ATP-BINDING CASSETTE TRANSPORTER 28 1463 - -
Psa6g2129 1463 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 28 1463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2129 Psa-Chr6 147215208 147224466 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2129 887 1074 Calmodulin-binding Proteins AT2G36910 26.238 3.34e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2129 K08711 - gmx:100788067 2409.41