Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa6g2129 | ATGGAAGCAGAAACGGGTGAAGAACATGTGGTGAGGCGAGTTATTGATGGAAGGGGGAGGAAAAGTTTTGGAGAGTTGATAGAAAACTCAGCAAGCTTCCATGAGAGAAGTGACGAAGAGGAGACGAAATGGGAGGCGTTATGGAGGCTTCCAACATATGATAGGATGAGGAAAGTGATTTTGAAGCAAGTTCTTGATAATGGAAAAGTTAACTATGAAGAAGTTGATATCAACAAGCTTGGAGTAGAGGAAAAGAAGCATATTTTGGAGAGCATAATAAAGACTGCGGAAGTAGATAATGAGAAATTTCTTCAAAAAATGAGAGACAGAATTGATAGGGTAGGAATTGAGATTCCTAAGATTGAAGTCCGGTTTGAGAATTTAACAGTTGAAGGGGATGCATATGATGGAACCAGGGCTTTACCAACACTAATCAATGCTACCCTCAATATAATTGAGGGACTTTTGGGTTATATCAAGATTTTGGCATTTAAGAAAAGGGTTATCAAGATTCTCAAAGATGTTAGTGGAATTGTAAAACCATCAAGAATGACTTTATTACTGGGACCTCCAGGTTCAGGAAAAACTACACTGCTTCAGGCACTTGCTGGGAAAATGGACAAGGATCTAAGGGCATCAGGAAGAGTGACTTACAATGGTCATGAATTGTCAGAATTTGTTCCTCAAAGAACATGTGCTTATATTAGTCAGGATGATCTTCACCATGGAGAAATGACAGTGAGAGAGACGCTGGACTTGTCCGGACGCTGCTTAGGTGTTGGAACAAGGTATGATATGTTGATAGAATTGTCAAGACGAGAAAAAGCATCAGGCGTCAAACCAGATCCTGAAATAGATGCTTTCATGAAAGCCACATCAATGGAAGGTCAAGAAACAAGTCTTGTTACAGATTATATTCTCAAGATTCTTGGGTTGGAAACGTGTGCTGATATTTTGGTGGGAGATGAGATGAGAAGGGGCATATCAGGTGGACAAAAGAAGCGTTTAACCACTGGTGAGATGTTGGTAGGACCTGCAAAAGCCCTCTTTATGGATGGAATTTCAACTGGTTTGGATAGTTCTACAACCTTCCAAATTGTCAGGTTTATGAGGCAGATGGTTCATATCATGGATGTCGCTATGATAATCTCACTTCTTCAACCTGCACCAGAAACGTACAACCTTTTTGATGACATAGTATTACTTTCAGAAGGTGAGATTGTTTATCAAGGTCCGCGTGAGAGTGTTCTAGACTTTTTTCAAAGTGTCGGCTTCAAGTGCCCAGAAAGGAAAGGAATTGCAGACTTTTTACAAGAGGTAACTTCTAGAAAGGATCAAGAGCAGTACTGGTTCAGAAGGGACATACCTTATCAATACGCTAGTGTGCCTGATTTTGTAACGCACTTCAACAATTACTGCATCGGTAAACAACTTCACGAAGAGATTCAAGTTCCATTTGATTCTAGTAAAACTCATCCTGCTGCATTAGTGAAGGAAAAGTATGGAATCCCCAAATGGGAACTCTTCAAGGCATGTTTTTCAAGAGAATGGCTATTCATGAAGCGTAGCTACTTTGTATATATATTTAAGACTTTTCAGATTACTATCATGTCTATAATTACCATGACAGTATTTTTTAGAACAAAAATGGAGCATGGTCAACTTGAGGATGGGGGGAAATATTATGGTGCACTGTTTTTCAGCCTTATCAATGTCATGTTCAATGGAGCGGCAGAACTTGCAATGACTGTTAACAGACTTCCTGTTTTCTTCAAGCAGAGAGATTTCTTATTTTATCCAGCATGGGCTTTTGCATTGCCCATTTGGGTCCTCAGAGTTCCTCTCTCTATAGTGGAATCAGTATTATGGATCATCCTCACTTATTATACTATTGGTTTTGCTCCAGCACCTAGTAGGTTTTTCCGTCAACTACTGGCATTCTTCTGTGTGAATCAAATGGCTCTATCCCTTTTCCGGTTCATTGCTGCAATTGGAAGGACAAGAGTTGTGGCTAACACATTTGCTTCCATAACCATTTTAGCTGTTTTCGTCTTAAGTGGATTTACTGTTTCAAGAGATGATATTGGGCCATGGATGATATGGTGCTATTATGCTTCACCTATGATGTATGGAATGACTGCAATAAGCATCAATGAATTTCTAGACAAAAGATGGAATACTCCTAATATGGACCCTAGAATCGATGAACCCACAGTTGGAAAAGCATTACTCAAGGCCAGAGGCATATTTACAGAAGACTATTGGTATTGGATATCTATCGGTGCTCTTATAGGATTTTCTCTACTGTTCAATGTCTGTTTCATTCTTGCTCTAACTTACTTGGACCCATTCAGAAGCTCAAAATCTATCATGGTGGAACAGGAAGACAATAGGGAAACCACAACGACATCCTCCTCAGTGGAAAAAACAACAGGAGAAATTACAGAAAATTCAGCTTCAAATGTTGAATCATTTGAAGGTGTTGACATGGAAGTAAGAAACAACACACGTAGTTCTATTCCTAAAGCTGCAAAGAATGCAAAATTCAGGAAGGGAATGGTGTTACCCTTTCAGCCTCTGTCACTTGTTTTTGAAAATGTGAATTATCACATTGATATGCCAAATGAAATGAAGAAGCAAGGAATTGAAGAGAATAAACTCCAACTACTAAGAAACATAAGTGGTGCTTTTAGGCCTGGAATTTTAACAGCATTAGTTGGTGTAAGTGGTGCTGGAAAAACCACTTTGATGGATGTGCTTGCAGGAAGGAAAACTAGTGGTCACATTGAAGGAAGTATCAGCATATCGGGTTATCACAAGAACCAAGCAACTTTTGCTCGGATTAGTGGTTATTGTGAACAAAACGATATCCACTCTCCCAATATTACAGTTTATGAGTCGCTTCTGTTTTCTTCTTGGTTGCGGCTCAGTAAAGAGGTTGATATAGAAACACGAAAGATGTTTATTGAGGAAGTTATAGAGCTAGTTGAGTTACATCTAGTGAGAAATTTCTTAGTCGGCCTTCCTGGAATAGATGGCTTATCAACTGAGCAGAGAAAGAGGCTTACCATTGCTGTAGAATTGGTTGCGAATCCTTCCATTATCTTTATGGATGAACCAACAACTGGTCTTGATGCTAGAGCTGCAGCAGTTGTTATGCGTACAGTTAGAAACACAGTGGATACAGGGAGAACTGTTGTGTGCACAATTCATCAACCAAGCATTGATATATTTGAACATTTTGATGAGTTGCTTTTGTTGAAGACCGGTGGACAAGTGATATATGGTGGCCCTCTAGGTCGAAATTCTGAGAAACTTATCGAGTACTTTGAGGCTATTACAGGAATTCCAAAGATTGAAGATGGATATAATCCAGCTACATGGATGCTGGAGATCAGTTCTCCTGTGGTTGAGTCTCAGCTTGATATAGATTTTGCGGAATTATACAATAACTCAAGCCTTTACGAAAAGAGCCAAGAACTTATCAAGGAACTATCCACACCAGCACCTGGAACAAAGGACCTTTACTTTCCATCTAAATACTCGCAACCATTTGTTACTCAATGCAATGCTTGCTTCTGGAAACAGTACTGTTCCTATTGGAGGAATCCACAGTATAATGCCATCAGATTCTTCATCACAATAGTTATTGGTGTTTTGTTTGGACTTATTTATTGGAAAAAAGGAGATAAGATACAAAAGGAACAAGACCTTTTAAATCTTGTTGGAGCTATGTATTCCTCTGTTATTTTCCTTGGTGCATCCAACACTAGCAGTGTGCAACCTATTATTGCAATAGAAAGAACAGTTCTATACCGTGAAAGAGCAGCTGGATTGTACTCAGAGCTTCCCTATGCAATTGGTCAGATTGCGATTGAAGTCATTTATGTTGCAATCCAAAGTCTGATATACTCCACTATCCTCTACTGGATGATTGGGTTCCAACCACAAGTCGAAAACTTCATTTGGTTTTACTTCTTCATATTCATGTCCTTTATCTACTTCACACTATATGGAATGATGACGGTGGCCCTGACACCAAACCACCAGATTGCTGCCATCGTGATGTCTTTCTTCATCAGTTTTTGGAACCTATTCTCTGGTTTTCTTATTCCAAGAACGCAAATTCCAATATGGTGGAGGTGGTATTATTGGGCATCTCCTGTGGCATGGACTATATATGGACTGGTGACATCCCAGGTGGGTGATATGAATAGTCCAATAGAGGTTCCTGGATATAGGCTCATGACAGTAAAAGATTACCTTGAGAGACGATTGGGCTTTGAACATGACTTCCTTGGATTTGTTGTTTTGGCTCATATTGCTTTTTGCCTTCTCTTCCTGTTTGTATTCGCCTATGGCATCAAGTTTTTAAACTTCCAGAAAAGATAA | 4392 | 0.3941 | MEAETGEEHVVRRVIDGRGRKSFGELIENSASFHERSDEEETKWEALWRLPTYDRMRKVILKQVLDNGKVNYEEVDINKLGVEEKKHILESIIKTAEVDNEKFLQKMRDRIDRVGIEIPKIEVRFENLTVEGDAYDGTRALPTLINATLNIIEGLLGYIKILAFKKRVIKILKDVSGIVKPSRMTLLLGPPGSGKTTLLQALAGKMDKDLRASGRVTYNGHELSEFVPQRTCAYISQDDLHHGEMTVRETLDLSGRCLGVGTRYDMLIELSRREKASGVKPDPEIDAFMKATSMEGQETSLVTDYILKILGLETCADILVGDEMRRGISGGQKKRLTTGEMLVGPAKALFMDGISTGLDSSTTFQIVRFMRQMVHIMDVAMIISLLQPAPETYNLFDDIVLLSEGEIVYQGPRESVLDFFQSVGFKCPERKGIADFLQEVTSRKDQEQYWFRRDIPYQYASVPDFVTHFNNYCIGKQLHEEIQVPFDSSKTHPAALVKEKYGIPKWELFKACFSREWLFMKRSYFVYIFKTFQITIMSIITMTVFFRTKMEHGQLEDGGKYYGALFFSLINVMFNGAAELAMTVNRLPVFFKQRDFLFYPAWAFALPIWVLRVPLSIVESVLWIILTYYTIGFAPAPSRFFRQLLAFFCVNQMALSLFRFIAAIGRTRVVANTFASITILAVFVLSGFTVSRDDIGPWMIWCYYASPMMYGMTAISINEFLDKRWNTPNMDPRIDEPTVGKALLKARGIFTEDYWYWISIGALIGFSLLFNVCFILALTYLDPFRSSKSIMVEQEDNRETTTTSSSVEKTTGEITENSASNVESFEGVDMEVRNNTRSSIPKAAKNAKFRKGMVLPFQPLSLVFENVNYHIDMPNEMKKQGIEENKLQLLRNISGAFRPGILTALVGVSGAGKTTLMDVLAGRKTSGHIEGSISISGYHKNQATFARISGYCEQNDIHSPNITVYESLLFSSWLRLSKEVDIETRKMFIEEVIELVELHLVRNFLVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEHFDELLLLKTGGQVIYGGPLGRNSEKLIEYFEAITGIPKIEDGYNPATWMLEISSPVVESQLDIDFAELYNNSSLYEKSQELIKELSTPAPGTKDLYFPSKYSQPFVTQCNACFWKQYCSYWRNPQYNAIRFFITIVIGVLFGLIYWKKGDKIQKEQDLLNLVGAMYSSVIFLGASNTSSVQPIIAIERTVLYRERAAGLYSELPYAIGQIAIEVIYVAIQSLIYSTILYWMIGFQPQVENFIWFYFFIFMSFIYFTLYGMMTVALTPNHQIAAIVMSFFISFWNLFSGFLIPRTQIPIWWRWYYWASPVAWTIYGLVTSQVGDMNSPIEVPGYRLMTVKDYLERRLGFEHDFLGFVVLAHIAFCLLFLFVFAYGIKFLNFQKR* | 1464 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa6g2129 | 1463 | Pfam | Plant PDR ABC transporter associated | 725 | 790 | IPR013581 | - | |
Psa6g2129 | 1463 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 885 | 1098 | IPR027417 | - | |
Psa6g2129 | 1463 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 156 | 429 | IPR003439 | GO:0005524 | |
Psa6g2129 | 1463 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 169 | 428 | IPR027417 | - | |
Psa6g2129 | 1463 | Pfam | ABC-2 type transporter | 387 | 440 | IPR043926 | GO:0140359 | |
Psa6g2129 | 1463 | Pfam | ABC-2 type transporter | 1071 | 1142 | IPR043926 | GO:0140359 | |
Psa6g2129 | 1463 | MobiDBLite | consensus disorder prediction | 796 | 820 | - | - | |
Psa6g2129 | 1463 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 68 | 209 | IPR027417 | - | |
Psa6g2129 | 1463 | MobiDBLite | consensus disorder prediction | 793 | 820 | - | - | |
Psa6g2129 | 1463 | Pfam | ABC-transporter N-terminal | 96 | 147 | IPR029481 | - | |
Psa6g2129 | 1463 | Gene3D | - | 862 | 1111 | IPR027417 | - | |
Psa6g2129 | 1463 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 871 | 1114 | IPR003439 | GO:0005524 | |
Psa6g2129 | 1463 | SMART | AAA_5 | 899 | 1091 | IPR003593 | - | |
Psa6g2129 | 1463 | SMART | AAA_5 | 181 | 406 | IPR003593 | - | |
Psa6g2129 | 1463 | Pfam | ABC-2 type transporter | 508 | 720 | IPR013525 | GO:0016020|GO:0140359 | |
Psa6g2129 | 1463 | Pfam | ABC-2 type transporter | 1187 | 1399 | IPR013525 | GO:0016020|GO:0140359 | |
Psa6g2129 | 1463 | Pfam | ABC transporter | 172 | 352 | IPR003439 | GO:0005524 | |
Psa6g2129 | 1463 | Pfam | ABC transporter | 890 | 1041 | IPR003439 | GO:0005524 | |
Psa6g2129 | 1463 | Gene3D | - | 162 | 458 | IPR027417 | - | |
Psa6g2129 | 1463 | CDD | ABCG_PDR_domain2 | 859 | 1097 | IPR034003 | - | |
Psa6g2129 | 1463 | PANTHER | ATP-BINDING CASSETTE TRANSPORTER | 28 | 1463 | - | - | |
Psa6g2129 | 1463 | PANTHER | DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN | 28 | 1463 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa6g2129 | Psa-Chr6 | 147215208 | 147224466 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa6g2129 | 887 | 1074 | Calmodulin-binding Proteins | AT2G36910 | 26.238 | 3.34e-06 | 50.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa6g2129 | K08711 | - | gmx:100788067 | 2409.41 |